Gene
| Gene Model ID | pfu_aug2.0_255.1_17183 |
|---|---|
| Locus | scaffold255.1 : 10906 ... 17492 : + |
| To GenomeBrowser | scaffold255.1:10906..17492 |
| Genes list of scaffold | scaffold255.1 |
| Synonym | pfu_aug1.0_233.1_22095 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| eh domain-containing protein 3 | GO:0005509 GO:0005525 GO:0032456 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_255.1_17183.t1 | 1 | 1 | Dynamin_N | 61 | 221 | 2.2e-22 | 79.6 | 3.4e-25 | 4.2e-22 | 78.7 |
| pfu_aug2.0_255.1_17183.t1 | 1 | 1 | MMR_HSR1 | 61 | 220 | 7.9e-09 | 35.4 | 1.4e-11 | 1.8e-08 | 34.3 |
| pfu_aug2.0_255.1_17183.t1 | 1 | 1 | EF-hand_4 | 542 | 631 | 2.3e-18 | 65.8 | 5.0e-21 | 6.2e-18 | 64.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_255.1_17183.t1 | gi|676489063|ref|XP_009064815.1| | hypothetical protein LOTGIDRAFT_196647 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_255.1_17183.t1 | gi|524903041|ref|XP_005107738.1| | PREDICTED: EH domain-containing protein 3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_255.1_17183.t1 | gi|241690307|ref|XP_002411757.1| | endocytosis/signaling protein EHD1, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_255.1_17183.t1 | gi|291233539|ref|XP_002736717.1| | PREDICTED: EH domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_255.1_17183.t1 | gi|751201839|ref|XP_011169329.1| | PREDICTED: EH domain-containing protein 3 [Solenopsis invicta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_255.1_17183.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_255.1_17183.t1 atgaagcggtggttgtcgggtgacgaccgacgtcgtaaggaacctgaagtgttcaatagcgtagcagacggtcttaaatc tctgtataaacagaagttgttacctcttgaggaacattacaaatttcacgattttcattctccccaacttgacgatcccg attttgatgctaagcccatgatcttacttataggacaatattcgaccgggaaaaccacgttcatcaggtatctactggag caagactttccaggaatccgtatcggcccagaaccaaccactgatcgcttcatagctgttatgggcggtgaacaagaggg ggtagtgccaggaaacgcccttgttgttgataccaaaaagcaatttcgaccacttacaaaatttggcaatgctttcctta accgttttcagtgttccactctgagtaatccagtatgtgacagtttgacaatcattgacactcctggaattctgtctggt gagaaacaacgtgttgatcggggatatgattttgcaggtgttctagaatggtttgcagagagagtagacagaattcttct cctctttgatgcacacaaacttgacatttctgatgaattccgccgtgcaatagatgccatcaagggctatgatgacaaaa tccgtatagttttaaacaaggcagatatggttgaccatcagcagttgatgcgagtatatggtgctttgatgtggtcatta ggtaaagttctcaacaccccagaagtagctcgggtctatataggatctttctgggacaatccattgcagtttgacatgaa tagaaagctgttcgaactggaggaacaagatttattcaatgacctgcagagtcttcctagaaacgctgcgctgagaaaac tgaatgacctcattaagagagccagacttgcaaagtattatgtaatgtctgtatctataagggcttcagaactacctttc tttggtcagaaagccaaccacttcaagtatggcgtcataatcggactgaaaatagctgctatagacaatgatagatgcaa gtctgatggagcaagatcagctcgagccgttttagcgcgtatatttgaccatgacaccgtccctatgtatcagaatcccg ctgtatcaagacctagtctgcatgttgacccgagggagggaccgaacaggcctgcacccattctcccatgcacattatgt agaatcaacgaggtacatgcgtacatcattagttcattacaaaaggggatgccgtcaatgtttggaaaggattccaagaa aaaagaaatgatcaagaacctaggagagacctacgcacagatagagagggaccacaaaatttctaggggcgattttcctg atttagctcgtatgaaagagcagctacagcatcacgacttctccaaattccatccaataaaaattaagctactggaagca gtcgatcatatgttggccaatgatatcgctcgtctcatgcagatgattcctaacgaggaagcagtcatgtccaaggcgcc agcggtcaggggcggggcctttgacaccatgaacgacagcaagtttggatacggtagaggcgaaggagtggatgaaggta gaggggagctggaatggatcgtcgggcaggaaaaatataaatacgacgaggcgtttgaaaagctgaatcccgtaaatggc aaaatcactggtgccgctgccaaatccgaaatggtgaaatccaaacttcccaacgccgtgctgggtaaggtttggaaatt gtcagacattgaccaggatggaatgttggatgaagatgaatgggcgttggccaatcacctgatcaagatcaagttggacg gacacgacttaccagcaactctaccagaccatcttataccgccctcaaagaaaaaaggattttga |
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Protein
| Protein ID | pfu_aug2.0_255.1_17183.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_255.1_17183.t1 MKRWLSGDDRRRKEPEVFNSVADGLKSLYKQKLLPLEEHYKFHDFHSPQLDDPDFDAKPMILLIGQYSTGKTTFIRYLLE QDFPGIRIGPEPTTDRFIAVMGGEQEGVVPGNALVVDTKKQFRPLTKFGNAFLNRFQCSTLSNPVCDSLTIIDTPGILSG EKQRVDRGYDFAGVLEWFAERVDRILLLFDAHKLDISDEFRRAIDAIKGYDDKIRIVLNKADMVDHQQLMRVYGALMWSL GKVLNTPEVARVYIGSFWDNPLQFDMNRKLFELEEQDLFNDLQSLPRNAALRKLNDLIKRARLAKYYVMSVSIRASELPF FGQKANHFKYGVIIGLKIAAIDNDRCKSDGARSARAVLARIFDHDTVPMYQNPAVSRPSLHVDPREGPNRPAPILPCTLC RINEVHAYIISSLQKGMPSMFGKDSKKKEMIKNLGETYAQIERDHKISRGDFPDLARMKEQLQHHDFSKFHPIKIKLLEA VDHMLANDIARLMQMIPNEEAVMSKAPAVRGGAFDTMNDSKFGYGRGEGVDEGRGELEWIVGQEKYKYDEAFEKLNPVNG KITGAAAKSEMVKSKLPNAVLGKVWKLSDIDQDGMLDEDEWALANHLIKIKLDGHDLPATLPDHLIPPSKKKGF |
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