Gene
| Gene Model ID | pfu_aug2.0_255.1_17186 |
|---|---|
| Locus | scaffold255.1 : 79658 ... 88345 : - |
| To GenomeBrowser | scaffold255.1:79658..88345 |
| Genes list of scaffold | scaffold255.1 |
| Synonym | pfu_aug1.0_7605.1_53003 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_255.1_17186.t1 | 2 | 1 | Arv1 | 2 | 150 | 9.5e-14 | 51.7 | 6.4e-18 | 9.5e-14 | 51.7 |
| pfu_aug2.0_255.1_17186.t1 | 2 | 2 | Arv1 | 157 | 174 | 9.5e-14 | 51.7 | 0.47 | 7000.0 | -3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_255.1_17186.t1 | gi|585668074|ref|XP_006817431.1| | PREDICTED: protein ARV1-like [Saccoglossus kowalevskii] | 1.0e-22 |
| pfu_aug2.0_255.1_17186.t1 | gi|478516374|ref|XP_004432422.1| | PREDICTED: protein ARV1 [Ceratotherium simum simum] | 6.0e-20 |
| pfu_aug2.0_255.1_17186.t1 | gi|597735500|ref|XP_007230026.1| | PREDICTED: protein ARV1 [Astyanax mexicanus] | 7.0e-20 |
| pfu_aug2.0_255.1_17186.t1 | gi|507687643|ref|XP_004712223.1| | PREDICTED: protein ARV1 [Echinops telfairi] | 3.0e-19 |
| pfu_aug2.0_255.1_17186.t1 | gi|260793797|ref|XP_002591897.1| | hypothetical protein BRAFLDRAFT_89414 [Branchiostoma floridae] | 8.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_255.1_17186.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_255.1_17186.t1 atgcaagcattccgacaccttctttataatagtcaaaacaagagtcacatcaaacttactattatcctgttattgtgtga tgcctttatgaagctcatgtcagaaggtagaaaacgggataccagttatgttatgccagaatatgtcatatactcagctc tggaatggagactttactggaattacttcttggcatctctagagttgttggtgtatttactgtttctgctaagtgtaaat cagatccacagttggagattatcacggctaggaagtcaggcaccacccaggggtaacccacccagcccttcttgcctcat aagagcaattctcctgtcaaactttggtaaggtgctagtcatccctgctgtactatggggtcataaccatggcaacctgg tcatctggctcagtaaagtgtttgtttgttcttcaaatatacaagcagtaagggctgtgaacacaaagcagagtttcatg tctattgtattgactgttctcattggtcagacagtttccatagtgactgcaaactgggtcaattttgtagcaacaattag gtga |
|
Protein
| Protein ID | pfu_aug2.0_255.1_17186.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_255.1_17186.t1 MQAFRHLLYNSQNKSHIKLTIILLLCDAFMKLMSEGRKRDTSYVMPEYVIYSALEWRLYWNYFLASLELLVYLLFLLSVN QIHSWRLSRLGSQAPPRGNPPSPSCLIRAILLSNFGKVLVIPAVLWGHNHGNLVIWLSKVFVCSSNIQAVRAVNTKQSFM SIVLTVLIGQTVSIVTANWVNFVATIR |
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