Gene
| Gene Model ID | pfu_aug2.0_255.1_17194 |
|---|---|
| Locus | scaffold255.1 : 280299 ... 282490 : + |
| To GenomeBrowser | scaffold255.1:280299..282490 |
| Genes list of scaffold | scaffold255.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_255.1_17194.t1 | 1 | 1 | Tctex-1 | 89 | 187 | 1.5e-25 | 88.9 | 1.4e-29 | 2.1e-25 | 88.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_255.1_17194.t1 | gi|260820457|ref|XP_002605551.1| | hypothetical protein BRAFLDRAFT_239782 [Branchiostoma floridae] | 6.00036e-42 |
| pfu_aug2.0_255.1_17194.t1 | gi|291224298|ref|XP_002732142.1| | PREDICTED: tctex1 domain-containing protein 1-B-like [Saccoglossus kowalevskii] | 2.0e-39 |
| pfu_aug2.0_255.1_17194.t1 | gi|390335126|ref|XP_003724075.1| | 4.0e-39 | |
| pfu_aug2.0_255.1_17194.t1 | gi|676434124|ref|XP_009047124.1| | hypothetical protein LOTGIDRAFT_68377, partial [Lottia gigantea] | 6.0e-39 |
| pfu_aug2.0_255.1_17194.t1 | gi|198418398|ref|XP_002130187.1| | PREDICTED: tctex1 domain-containing protein 1-like [Ciona intestinalis] | 5.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_255.1_17194.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_255.1_17194.t1 atgtctcgacgtctttcaaatcagacaagaagcgatgccacaaccccagggcagcgtcgtcctaggggatccatagccaa cgcccggtttgccaccactggtaagtccgacaaaagaggggatctgacggacaccacaggattactagaaataacctccc tgggaacagatccgtctgacaacaatgccacacgccgggggatgcggatggagaatacatataaattggaaccggatgat gacagagttttccgagttggtactgttgaaaaaacaacagagaatatactggctgaacatttaaaagacgaaacatacga cccgttacgatgtcgtgaactaagtcaaaagctagcctcaacaatacttgaaagagtgaaagtcatgggatataaacgat acaaaattataacaaacgttagtataggaagcctcaaagaaaagcctggtatgcagtttggaagtcgttgtttatggaac aaaaacactgataattttgtaagtgttaaatactcgaacaattctatattcgctgttgcaatgatatacggtttgtactt tgaataa |
|
Protein
| Protein ID | pfu_aug2.0_255.1_17194.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_255.1_17194.t1 MSRRLSNQTRSDATTPGQRRPRGSIANARFATTGKSDKRGDLTDTTGLLEITSLGTDPSDNNATRRGMRMENTYKLEPDD DRVFRVGTVEKTTENILAEHLKDETYDPLRCRELSQKLASTILERVKVMGYKRYKIITNVSIGSLKEKPGMQFGSRCLWN KNTDNFVSVKYSNNSIFAVAMIYGLYFE |
|