Gene
| Gene Model ID | pfu_aug2.0_2553.1_12201 |
|---|---|
| Locus | scaffold2553.1 : 1 ... 18255 : - |
| To GenomeBrowser | scaffold2553.1:1..18255 |
| Genes list of scaffold | scaffold2553.1 |
| Synonym | pfu_aug1.0_24074.1_69609 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2553.1_12201.t1 | 6 | 1 | TPR_11 | 18 | 63 | 6.1e-30 | 102.6 | 4.7e-08 | 4.6e-05 | 22.9 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 1 | TPR_16 | 18 | 62 | 1.1e-14 | 54.5 | 0.064 | 64.0 | 4.4 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 1 | TPR_19 | 18 | 56 | 4.8e-11 | 42.8 | 0.057 | 56.0 | 4.1 |
| pfu_aug2.0_2553.1_12201.t1 | 6 | 1 | TPR_14 | 18 | 40 | 4.5e-06 | 26.8 | 0.75 | 740.0 | 1.2 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 1 | Apc3 | 29 | 93 | 7.3e-13 | 48.4 | 9.2e-05 | 0.091 | 12.9 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 1 | TPR_1 | 38 | 63 | 4.6e-13 | 48.1 | 0.0018 | 1.8 | 8.2 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 1 | TPR_2 | 40 | 63 | 7.5e-15 | 53.5 | 0.14 | 140.0 | 2.7 |
| pfu_aug2.0_2553.1_12201.t1 | 6 | 2 | TPR_11 | 78 | 105 | 6.1e-30 | 102.6 | 0.023 | 23.0 | 4.7 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 2 | TPR_2 | 78 | 104 | 7.5e-15 | 53.5 | 1.1 | 1100.0 | -0.1 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 2 | TPR_1 | 82 | 104 | 4.6e-13 | 48.1 | 0.43 | 420.0 | 0.8 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 2 | TPR_16 | 190 | 240 | 1.1e-14 | 54.5 | 2.4e-06 | 0.0023 | 18.5 |
| pfu_aug2.0_2553.1_12201.t1 | 6 | 3 | TPR_11 | 193 | 238 | 6.1e-30 | 102.6 | 1.1e-05 | 0.01 | 15.4 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 3 | TPR_1 | 196 | 216 | 4.6e-13 | 48.1 | 0.17 | 170.0 | 2.0 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 2 | TPR_19 | 196 | 243 | 4.8e-11 | 42.8 | 0.011 | 11.0 | 6.3 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 3 | TPR_2 | 197 | 216 | 7.5e-15 | 53.5 | 0.02 | 20.0 | 5.4 |
| pfu_aug2.0_2553.1_12201.t1 | 6 | 2 | TPR_14 | 197 | 225 | 4.5e-06 | 26.8 | 0.18 | 180.0 | 3.2 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 2 | Apc3 | 286 | 309 | 7.3e-13 | 48.4 | 2.8 | 2800.0 | -1.5 |
| pfu_aug2.0_2553.1_12201.t1 | 2 | 1 | SET | 317 | 548 | 4.6e-16 | 59.5 | 1.9e-10 | 1.9e-07 | 31.5 |
| pfu_aug2.0_2553.1_12201.t1 | 2 | 1 | zf-MYND | 585 | 626 | 9.6e-11 | 41.3 | 7.8e-10 | 7.7e-07 | 28.8 |
| pfu_aug2.0_2553.1_12201.t1 | 6 | 4 | TPR_11 | 650 | 709 | 6.1e-30 | 102.6 | 2.5e-09 | 2.4e-06 | 27.0 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 4 | TPR_2 | 652 | 675 | 7.5e-15 | 53.5 | 0.00087 | 0.86 | 9.6 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 3 | TPR_16 | 652 | 696 | 1.1e-14 | 54.5 | 1.1e-05 | 0.011 | 16.3 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 4 | TPR_1 | 653 | 670 | 4.6e-13 | 48.1 | 0.068 | 68.0 | 3.3 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 3 | Apc3 | 653 | 670 | 7.3e-13 | 48.4 | 0.0025 | 2.5 | 8.3 |
| pfu_aug2.0_2553.1_12201.t1 | 6 | 3 | TPR_14 | 653 | 683 | 4.5e-06 | 26.8 | 0.032 | 32.0 | 5.5 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 3 | TPR_19 | 656 | 697 | 4.8e-11 | 42.8 | 1.1e-06 | 0.0011 | 19.2 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 4 | Apc3 | 660 | 738 | 7.3e-13 | 48.4 | 1.5e-11 | 1.5e-08 | 34.6 |
| pfu_aug2.0_2553.1_12201.t1 | 6 | 4 | TPR_14 | 682 | 712 | 4.5e-06 | 26.8 | 0.28 | 270.0 | 2.6 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 5 | TPR_2 | 684 | 712 | 7.5e-15 | 53.5 | 2.4e-05 | 0.024 | 14.5 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 5 | TPR_1 | 684 | 712 | 4.6e-13 | 48.1 | 6.0e-06 | 0.0059 | 16.1 |
| pfu_aug2.0_2553.1_12201.t1 | 6 | 5 | TPR_11 | 721 | 752 | 6.1e-30 | 102.6 | 0.0002 | 0.2 | 11.3 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 6 | TPR_2 | 721 | 747 | 7.5e-15 | 53.5 | 0.001 | 1.0 | 9.4 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 4 | TPR_16 | 721 | 752 | 1.1e-14 | 54.5 | 0.0017 | 1.7 | 9.4 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 6 | TPR_1 | 721 | 746 | 4.6e-13 | 48.1 | 0.00012 | 0.12 | 12.0 |
| pfu_aug2.0_2553.1_12201.t1 | 6 | 5 | TPR_14 | 721 | 751 | 4.5e-06 | 26.8 | 0.26 | 260.0 | 2.7 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 4 | TPR_19 | 726 | 750 | 4.8e-11 | 42.8 | 2.1 | 2100.0 | -0.9 |
| pfu_aug2.0_2553.1_12201.t1 | 6 | 6 | TPR_11 | 869 | 919 | 6.1e-30 | 102.6 | 1.6e-07 | 0.00016 | 21.2 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 7 | TPR_1 | 877 | 903 | 4.6e-13 | 48.1 | 0.016 | 15.0 | 5.3 |
| pfu_aug2.0_2553.1_12201.t1 | 7 | 7 | TPR_2 | 880 | 903 | 7.5e-15 | 53.5 | 0.0017 | 1.7 | 8.7 |
| pfu_aug2.0_2553.1_12201.t1 | 6 | 6 | TPR_14 | 880 | 912 | 4.5e-06 | 26.8 | 0.041 | 40.0 | 5.2 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 5 | TPR_19 | 881 | 916 | 4.8e-11 | 42.8 | 0.0019 | 1.9 | 8.9 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 5 | TPR_16 | 883 | 918 | 1.1e-14 | 54.5 | 0.015 | 15.0 | 6.3 |
| pfu_aug2.0_2553.1_12201.t1 | 5 | 5 | Apc3 | 885 | 923 | 7.3e-13 | 48.4 | 2.9 | 2900.0 | -1.6 |
| pfu_aug2.0_2553.1_12201.t1 | 2 | 2 | SET | 1005 | 1301 | 4.6e-16 | 59.5 | 2.1e-07 | 0.00021 | 21.6 |
| pfu_aug2.0_2553.1_12201.t1 | 2 | 2 | zf-MYND | 1080 | 1110 | 9.6e-11 | 41.3 | 4.4e-09 | 4.3e-06 | 26.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2553.1_12201.t1 | gi|676456276|ref|XP_009054274.1| | hypothetical protein LOTGIDRAFT_232186 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2553.1_12201.t1 | gi|524909769|ref|XP_005109782.1| | PREDICTED: SET and MYND domain-containing protein 5-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2553.1_12201.t1 | gi|260788416|ref|XP_002589246.1| | hypothetical protein BRAFLDRAFT_74594 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_2553.1_12201.t1 | gi|676456279|ref|XP_009054275.1| | hypothetical protein LOTGIDRAFT_160845 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2553.1_12201.t1 | gi|524894275|ref|XP_005103639.1| | PREDICTED: uncharacterized protein LOC101862288 isoform X2 [Aplysia californica] | 9.0e-39 |
Transcript
| Transcript ID | pfu_aug2.0_2553.1_12201.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2553.1_12201.t1 atgacgaatccagaggaaagacctaaacctggaatagaaagtggtacagcaaaactagaaaaagctatagcaggattaac agaggcaatccaaaatggcaacgataatgcagaaatgttcatcagtagagccacttgtcacatcaaactgtccaaatttt acaaagcgcttgaagacgcaaaggaagccaggctgagaggggaacagagcgtcaatttagctttaattggaggtgacgca gccgtaaatctgtcaaaaatggaggacgcatgtagcttttacacgatgggactgaaagtcgaccctaccaataccagtgt cacagatcgtctgcaaatgctacaggaaatgattttacccgattacgacctcgagggcgggtgtgactccgatcaaggat atagtgcagttactctattcaaccaggaaccatatccaggtgatgatgaactgattagcaaagagaaacagaccatcctg gccaagttttgtctcgaagacacagaaccgtggaaagaaaatgtcgaggacgctgaaaaacaaagagcgtccaacattgc aatgggggcacacgaattcatggttgacaataagctagaagatgcattgaaagaatatacattagccgtcaaagcggacc ccggtaattccattttgaggcgtctgagagcggaagttctgtacattctggacgacaagtatgccgctctccgggaatta tgggcagttccaacagagaagaaatcactcgatgtatggaagtttggaggacaaatactatatgaaattaacatgccact ccacgccgaagtttggctgaaaacagcgacgaagatgaccggtaaccaggacgatgcggctaaagtattgttccaaaaag cacgaacccaccgactttactcggcgatgagcaaggattttcccatcaacatagattttggtgaacatggaagaagtata tttgctacaaaggaaattaaaactggcaatgaagtattcactgacctgccaatggttatggggaaaatgctcgataaaga gacgtacggtcaggacatatgtgacaactgcgcaacttcccttatgacgtcgagagattattttggaggcagaatctggg cagggattgtaacagcagccaaggaaatgatgaaagacgcaggcgttgacaagcccaccacagagcactggctgaaagct aaaagtccatataagagatttctcgcatttggagtggactccccatcgaaaaagtacaaagttgtttacaacttgattag agacatcttcaccgattgcggggacgatatccaatacaacataacagagagcgagttcaatggccgattcttccaggctg agtgtaatttccacgtcttttcagcaccagtaacgccttatcatcgattcaaggagcgtatatccaaactcgagggagac gacagagtcaaaagtacccttcaaaagctgaaagctgaaccaaacgtggcacccctgtgcggtatattcccccttcttca ctgcatgaaccattcctgttatcaaaatgttgaagtgtgtggtgccgatctggagggatacggcggagtaagagttcgcg ccatttctaatttcaaagcaggcgacgagctgtatgtgtcgtatgtcgatccagccattccccgtaagttgcgcagagct tggttgttccgaaattacaatttctggtgtcgatgtacgcgatgcgaattcgaaggcgacggaccggaagagtgcacgga atgtaagaaggcagcggcgggggagaagtttccggcgtgtggacagtgtcatagggcgtggtactgctcagtgtcttgtc agaaggtggcatggaagagaggtcataaaaagatctgtcaggctatcgacacaaaagataaacagaaatgtcaaagcaac gttacaatggattcaactgaggaaaagacgaaagaagcctatgccctgtacaaagatggcgactacaagtccgccatcaa cctctacacctctctattatcagagagtgaggacgcagctcacctggcaatgcgtgcagactgctattttaaacttgagg actatgcgtcttgtctcgatgacgccaagagggtcatagctttggacgaggataactgtataacatcagcagttcttgga ggccaggcagcaaccaaactggagaagtatgaagacgcatatcattgttataaggcgggaatcaaagcccagcctggtca cccggatgtcgtctccggcttgcgcaccttaaagaacctgattttgaaggatatggacaaaaaaggcagcgagnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgtgaggagaaggggtacaacgcacttgacttctg tagtcaggaggtgtatcctggtgacgacgaattatttacaaacgagattgaaatcctttccaaaatgtacaagatacaag cagagactttgtctccgagtcctaaagatcccaaaatcatggagcaagccgcaaacgccgcattgtcaggccataaatgc atgacggaagggaagtggtcggatgccgtgaaattgttttctgtggcccttgaccttgaccccagtaaccacattctgcg gcgactgagagcggaagttcatttcatgagagatgacgccataagttgtctgcgtgatctgtggctcatccctaaaatga gcagaatggccgatgcctggaagttaggaggtatgaaaaattctctggcagttggagctgttagtagtagcagaattttg gttcagaaaagcaacacagctgtcgcaaggcaaagaccaggaagcaaaagttcttttccagaaagctcgagtaactcgtc tttacggtccactgactctggattcccggtgaaagtagatttcaccgagtacggacgagcaatattcgcaaaagaagaca ttaaagctggcgacatggtgttctcagatatccccatcgtattcggagaggtatttgatataagcaagaaagataacatc cctttctgtgaacattgcgcagcttcgttgctcacaccacgtgactatttcaaatcttctttttcaacatttgacccggg aatgagaaatcttgtagaaaaatactggccagattctaaaacaatcttctgtaaaaagtgtcagtacgtaaggtattgca gcgaaaaatgtcgcgatgcatcttgggatcagtaccatcacgtgatctgcccgtcacgaaataaggcggcaaagaaactg tttgaagtctgcgcaaatctgggactagaggaattagagggaggtagaaagaacatcctgtggagcggacacttcagtcc gttactcatggccagaatatgggctactatagcatcgtctgcgaagaagttgatgaaggagagtggagataatatcccga cgaaagagcagtgggcaaaggccaagagcccattcagaaagttcatagcctatggaaatattggaattcagaaggagctc acttttatacatgacgtcatgaaaggggtgttcaaagactgtggtgacggtgttacctacgacattgatgaaagagagtt caaaggtcgatatttccaggcagtgtgtaatcttcaagtcttttcctcgcccatcacgccttaccacaaattcctggaag ctttgggcgaggtggaaccgacggacgagacattcagattgttgaaattgctgaaacataaaccaccatcaaccaatgtg tgcggtatgtttccactccacgcatgtctaaatcactcatgcctgaacaacgttgaagtcacggatggtgacgttggcgg gagtaacacaaaagaagcaaaactgatgatggagataatggataatgatggagataagatcagatgcccagggagactga actgtttacgagtggcgagtatcccattgtacaaatgtacaggtattcatgataattatgctgttttaaaaagcgggact ggtggagggaaaaatgtcaaaactgtaccaaattttaacttcctcatcgtcatagacactgaagaactaaaataa |
|
Protein
| Protein ID | pfu_aug2.0_2553.1_12201.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2553.1_12201.t1 MTNPEERPKPGIESGTAKLEKAIAGLTEAIQNGNDNAEMFISRATCHIKLSKFYKALEDAKEARLRGEQSVNLALIGGDA AVNLSKMEDACSFYTMGLKVDPTNTSVTDRLQMLQEMILPDYDLEGGCDSDQGYSAVTLFNQEPYPGDDELISKEKQTIL AKFCLEDTEPWKENVEDAEKQRASNIAMGAHEFMVDNKLEDALKEYTLAVKADPGNSILRRLRAEVLYILDDKYAALREL WAVPTEKKSLDVWKFGGQILYEINMPLHAEVWLKTATKMTGNQDDAAKVLFQKARTHRLYSAMSKDFPINIDFGEHGRSI FATKEIKTGNEVFTDLPMVMGKMLDKETYGQDICDNCATSLMTSRDYFGGRIWAGIVTAAKEMMKDAGVDKPTTEHWLKA KSPYKRFLAFGVDSPSKKYKVVYNLIRDIFTDCGDDIQYNITESEFNGRFFQAECNFHVFSAPVTPYHRFKERISKLEGD DRVKSTLQKLKAEPNVAPLCGIFPLLHCMNHSCYQNVEVCGADLEGYGGVRVRAISNFKAGDELYVSYVDPAIPRKLRRA WLFRNYNFWCRCTRCEFEGDGPEECTECKKAAAGEKFPACGQCHRAWYCSVSCQKVAWKRGHKKICQAIDTKDKQKCQSN VTMDSTEEKTKEAYALYKDGDYKSAINLYTSLLSESEDAAHLAMRADCYFKLEDYASCLDDAKRVIALDEDNCITSAVLG GQAATKLEKYEDAYHCYKAGIKAQPGHPDVVSGLRTLKNLILKDMDKKGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXCEEKGYNALDFCSQEVYPGDDELFTNEIEILSKMYKIQAETLSPSPKDPKIMEQAANAALSGHKC MTEGKWSDAVKLFSVALDLDPSNHILRRLRAEVHFMRDDAISCLRDLWLIPKMSRMADAWKLGGMKNSLAVGAVSSSRIL VQKSNTAVARQRPGSKSSFPESSSNSSLRSTDSGFPVKVDFTEYGRAIFAKEDIKAGDMVFSDIPIVFGEVFDISKKDNI PFCEHCAASLLTPRDYFKSSFSTFDPGMRNLVEKYWPDSKTIFCKKCQYVRYCSEKCRDASWDQYHHVICPSRNKAAKKL FEVCANLGLEELEGGRKNILWSGHFSPLLMARIWATIASSAKKLMKESGDNIPTKEQWAKAKSPFRKFIAYGNIGIQKEL TFIHDVMKGVFKDCGDGVTYDIDEREFKGRYFQAVCNLQVFSSPITPYHKFLEALGEVEPTDETFRLLKLLKHKPPSTNV CGMFPLHACLNHSCLNNVEVTDGDVGGSNTKEAKLMMEIMDNDGDKIRCPGRLNCLRVASIPLYKCTGIHDNYAVLKSGT GGGKNVKTVPNFNFLIVIDTEELK |
|