Gene
| Gene Model ID | pfu_aug2.0_2561.1_05577 |
|---|---|
| Locus | scaffold2561.1 : 21113 ... 26335 : - |
| To GenomeBrowser | scaffold2561.1:21113..26335 |
| Genes list of scaffold | scaffold2561.1 |
| Synonym | pfu_aug1.0_1276.1_36922 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2561.1_05577.t1 | 2 | 1 | SOCS_box | 265 | 276 | 1.1e-06 | 28.3 | 0.027 | 400.0 | 0.9 |
| pfu_aug2.0_2561.1_05577.t1 | 2 | 2 | SOCS_box | 371 | 402 | 1.1e-06 | 28.3 | 1.7e-09 | 2.6e-05 | 23.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2561.1_05577.t1 | gi|524875473|ref|XP_005094464.1| | PREDICTED: uncharacterized protein LOC101857239 isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2561.1_05577.t1 | gi|675866008|ref|XP_009018564.1| | hypothetical protein HELRODRAFT_173712 [Helobdella robusta] | 2.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_2561.1_05577.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2561.1_05577.t1 atgggaaacagcaacagttccagacagaagggcagcagagcggaattttggaatcacatgttagagtgttcacctggatc acaggtacaatcagttacatacagcaaatggatcaaacattacaaagacatttctggtttcaacgactttgcggattttt ctacttgtcgagagtccagactgcgccatggcattttagtaaaaccagacacaactaacggctcctacatcattcccagt cttaagataaggtctgaacttcaattgattgagaaacaaggctggtatgttggtaatttcaaactacccaaagttccgtc tcccgatttccaggatccacattggttccgacgttctcactataacagacacaggagagagtgcagtgttgttgctgtct gtgataatttagtcgtcatacaagtaaacacaaatagatactatctgtcgcctagattttacattttagatcgagaaaga ggagaagtggtaggtcatttcttgactttctaccactgtcgcagatggtacgagtgctacatatcaccaaataaaaatgt tatactattacgtccagacaatttgaccaggattgtaagtcttccagataactgcctcttagaaaatgttaccatggaaa cagatgatgtcaatattaatgtacaggttatacctccgacccttcgtagccatgttttgacttttaaccgacatttaggg gatcactctgtacttgttgcttttcatactaatatcgatgtgaaacaaatagcaacatgggaaacagttcgaagtgttca gaatttagatctcccggcatccattcagcagatcaagtccagtccttctggtgattttatagcagtgagatgtgtgcagc ctgttcatagcaaggaatataatgtcaacatggtggcagttttgagcttccatacttttaacattttgtttaaggtggat gcaagaggatgctattggcctgtctcagaggttgtcaacctgcaagtcttcccacatttctctccgagtgaatcgagtat cgcaataatgaagaacggaacctacaaccgcaaggtcatgacctacaaacttccaatagcccagctaaatttacagtgcc tatgtcgtcgaaccctcctgcagtatgtgagctacagagatgtgagaaaacttccattaccgtcaagaattcagaacata ttacttgggaagccaggttgtttgaatgatcataaagcttga |
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Protein
| Protein ID | pfu_aug2.0_2561.1_05577.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2561.1_05577.t1 MGNSNSSRQKGSRAEFWNHMLECSPGSQVQSVTYSKWIKHYKDISGFNDFADFSTCRESRLRHGILVKPDTTNGSYIIPS LKIRSELQLIEKQGWYVGNFKLPKVPSPDFQDPHWFRRSHYNRHRRECSVVAVCDNLVVIQVNTNRYYLSPRFYILDRER GEVVGHFLTFYHCRRWYECYISPNKNVILLRPDNLTRIVSLPDNCLLENVTMETDDVNINVQVIPPTLRSHVLTFNRHLG DHSVLVAFHTNIDVKQIATWETVRSVQNLDLPASIQQIKSSPSGDFIAVRCVQPVHSKEYNVNMVAVLSFHTFNILFKVD ARGCYWPVSEVVNLQVFPHFSPSESSIAIMKNGTYNRKVMTYKLPIAQLNLQCLCRRTLLQYVSYRDVRKLPLPSRIQNI LLGKPGCLNDHKA |
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