Gene
Gene Model ID | pfu_aug2.0_2568.1_28864 |
---|---|
Locus | scaffold2568.1 : 21469 ... 28045 : - |
To GenomeBrowser | scaffold2568.1:21469..28045 |
Genes list of scaffold | scaffold2568.1 |
Synonym | pfu_aug1.0_11723.1_03125 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_2568.1_28864.t1 | 2 | 1 | C1q | 2 | 80 | 9.1e-37 | 125.8 | 6.6e-13 | 1.6e-09 | 37.7 |
pfu_aug2.0_2568.1_28864.t1 | 2 | 2 | C1q | 122 | 243 | 9.1e-37 | 125.8 | 6.7e-28 | 1.7e-24 | 86.2 |
Transcript
Transcript ID | pfu_aug2.0_2568.1_28864.t1 |
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Definition | - |
>pfu_aug2.0_2568.1_28864.t1 atggtcacaaacgaaggcaatgcgtgcgatccaaggcatggccacttcatcgcacctgtcactggactctaccagatctc agtctcaattatgtctattccgaatcaaaacttacattgtcagatccttaaatatggcgcgatagtttcccaattatatg gagcattgacagattacgatgctgatacacaagtcatcgtgttgaatcttcaggctggcgacatgatattggttgtaaac agcggaggacttcttcatcccgttaattctggaaatcttggagttgacgatctctatcaaatgattcagcaacagaacaa aactattcaacaacttctggagagagacactaaaacagtggggtttttcgcacgcctgacgcaaagcacgccgcatcttg gagtaggacaaactatcaagtttgacacagtcatcaccaacgaggggaatgcctacgacccaaagcaatcccgattcatc gcacctatcacaggactttaccagctatcagcgtctgtaatgtcacctccaaatgcgtacgtacactgtgcgatcgtaaa gaacggcgctgacgtatctccgctgtacggagcaacgacagattacgattccgacacacaaactattgtgttagatctgc aggcaggcgacatggtatgggtgaaacacaccggaactacaaacgagctaatccacaactacaatagctacttctctggt ttcctgatcaaacaacgctttgattga |
Protein
Protein ID | pfu_aug2.0_2568.1_28864.t1 |
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Definition | - |
>pfu_aug2.0_2568.1_28864.t1 MVTNEGNACDPRHGHFIAPVTGLYQISVSIMSIPNQNLHCQILKYGAIVSQLYGALTDYDADTQVIVLNLQAGDMILVVN SGGLLHPVNSGNLGVDDLYQMIQQQNKTIQQLLERDTKTVGFFARLTQSTPHLGVGQTIKFDTVITNEGNAYDPKQSRFI APITGLYQLSASVMSPPNAYVHCAIVKNGADVSPLYGATTDYDSDTQTIVLDLQAGDMVWVKHTGTTNELIHNYNSYFSG FLIKQRFD |