Gene
| Gene Model ID | pfu_aug2.0_2568.1_28865 |
|---|---|
| Locus | scaffold2568.1 : 35176 ... 63871 : + |
| To GenomeBrowser | scaffold2568.1:35176..63871 |
| Genes list of scaffold | scaffold2568.1 |
| Synonym | pfu_aug1.0_1449.1_37018 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2568.1_28865.t1 | 5 | 1 | ABC_membrane | 104 | 152 | 7.4e-36 | 123.9 | 3.0 | 3700.0 | -3.0 |
| pfu_aug2.0_2568.1_28865.t1 | 5 | 2 | ABC_membrane | 236 | 261 | 7.4e-36 | 123.9 | 9.5 | 12000.0 | -4.6 |
| pfu_aug2.0_2568.1_28865.t1 | 5 | 3 | ABC_membrane | 374 | 615 | 7.4e-36 | 123.9 | 6.0e-39 | 7.4e-36 | 123.9 |
| pfu_aug2.0_2568.1_28865.t1 | 5 | 4 | ABC_membrane | 622 | 662 | 7.4e-36 | 123.9 | 1.3 | 1600.0 | -1.8 |
| pfu_aug2.0_2568.1_28865.t1 | 1 | 1 | ABC_tran | 727 | 861 | 2.0e-21 | 76.7 | 4.1e-24 | 5.1e-21 | 75.4 |
| pfu_aug2.0_2568.1_28865.t1 | 5 | 5 | ABC_membrane | 1047 | 1093 | 7.4e-36 | 123.9 | 0.6 | 740.0 | -0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2568.1_28865.t1 | gi|195114746|ref|XP_002001928.1| | GI14505 [Drosophila mojavensis] | 0.0 |
| pfu_aug2.0_2568.1_28865.t1 | gi|158298785|ref|XP_553715.3| | AGAP009835-PA [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_2568.1_28865.t1 | gi|158296653|ref|XP_317002.4| | AGAP008437-PA [Anopheles gambiae str. PEST] | 0.0 |
| pfu_aug2.0_2568.1_28865.t1 | gi|584079295|ref|XP_006759758.1| | PREDICTED: multidrug resistance-associated protein 1 [Myotis davidii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2568.1_28865.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2568.1_28865.t1 atgtttccaggacacggttctaatttggttaccatgcgcttggttatggttgtcgttaccgttttatctctgcttcctga atcggcacagttggtcacaccagagagtgccgttaaatatactcagtgtactcaaattgtcgtagtagtaatagtagacc taactcagggactgtcacgtgaagataaccctcatgaaggacctgttgtttttgttgttaaatgctgcgtcaggattaca acatttctcctggctgccatactgacacaagttgagaggatgagtggtttggtaacgtcagctgtccagttcttattttg gatccttcttactctatgtaatatagtgccattctatacaaaaatcatactacagtggttggcctcatttgacaccatgt ttccaggacacggttctaatttggttaccatgcgcttggttatggttgtcgttaccgttttatctctgcttcctgaatcg gcacagttggtcacaccagagagtgccgttaaatatactcagtgttctcaaattgtcgtagtagtaatagtagacctaac tcagggactgtcacgggaagataaccctcatgaaggacctgttgtgtttgtcgttaaatgctgcgtcaggattacaacat ttctcctggctgccatactgacacaagttgagaggatgagtggtttggtaacgtcagctgtccaattcttattttggatc cttcttactctatgtaatattgtgccattctatacaaaaatcatactacagactcaccaagtggatctgtttgactttat tgttttccaaataacatacgctttcatcatagtacaaacactactgttttgctgggcagagccaagccctgaacctaagg caaatgatgacggaaagagagtttgtcctgagatggaatcctctatactaaacagactctacttctggtggatgaataag attgtagtaacagcgtacagaaagacgataactgaagatgatatctgggcacttaatacagacgacaggagtgaaactct ggttcctagattccaaaccaactggcagaaagaagtctctaaacatcaacaagtcattgtattgataacctatgcagaca acagagggactcagccgttatggacgagttatgtagcggctatagccttgtttgtagccgctcttgtacagtctgtattc taccaccaaaactatcatattggtatgacaatcggcatgaggattcgatgctctcttatagcggctatatataaaaaggc tctgacactaagttcccaagccaagaaggctttcaccctaggtgaagtggtcaacctgatgtcagtagactgtcagagga tccaggacacttttacctttgcctggtcattgatgacgtgtcctgtacaactgaccattggtatttacttactatgggga gttttaggtccatcatgtctagccggattagctgttttagtgttaatggtaccacttaattcatacatagtggttaaaca acgtaaactgcagtcaaaagttctatttctgaaagggaagagaatcaaactaatgaatgaaattctgaatggaatgaagg tgttaaagatgtacacgtgggagccgtcgtttcagcagcaggttaacgatatacgagaccaggagttggtgttactgagg aagatagcgtaccttcagggtggatctaccttctgctggatacttgctccgttcctggtaaccctagcgacctttgtgac ctatgtattggtatcagaagaccatttcctcgatgcccgtaaagctttcgtttccttgtccttgtttaatatcctccgct tacccattaacctgatgtcacaaaccatttctctcatggtacagatgtctttggccccgtttgcattttacacgttattt gacaaaagccattacatggatgccaacgagatgtttgtgtctttatccgtgttctctatcttgaaaacgcccatgaatct aacatctagtactataggacgaatgacccaggcgtgggtgtcagtaaagaggatccagtttttcttgtctggtaaagacc tggatccagacaatgtcaaacactccatagcttcagattacgccatagaaatggaacatgggacttttacatgggaccca gacagttctacatcaagcctgaaggatataaacctgagagttcccgagagtcagttggtagccgtggttgggcaggttgg gtgtggcaagtcttcactgatatcagctctccttggggagatggacaagacagatggcagggtcaatgtcaagggtagtg tagcctatgtacctcaggaagcttggatacagaatgctacactgatggacaatgttctgtttgggaaaccatatctacag aaaaagtacaaaaaagtcatagatgcatgtgccttgacccctgaccttgacatactcccaggtcgtgacctcacagagat tggagaaaaaggtattaatataagtggtggacagaaacagcgagtgagtttagctcgtgccgtgtacagtaactcggata tttacctcatggatgaccctctttctgccgtagattcgcacgtgggaaaacacatctttgaaaaagttataggtccaaaa ggcttgctaaaaaataagacgcgagttttggtgacgcatggtgtacactggttaccaatggtggacgtggtggttgtgat ggtgaacggtcgtatatctgagatgggcacatacaatcagctgatcacacatgacggtccgtttgctcagttcctgaagc agtacttcatggctgaagaggagagtgaggctgaggaagatccagatattatgagaataaaggagaagatgatggagcag gtagagtctgtaacgtctgagggtataacatcagacacggacggacagacaaggctgggaattagaagaagatccagggt ttcttcaacaaaaaagccgggagaactgcccaataaatctcctgatcctcccaagccacagaggcttaccaccgacgaaa cctcacaggagggagagatcaagtggtccgtttttggagactatgctaggagtatgggtacactgatcaccatctttgtc ctggtggtgttctcagcgtaccatgccaccagcgtgtttgctaactactggctgacatactggactgaagacgaattcct gtctaacacctcgaattcacctagtaccgatgagtaccagtcactcagtaactactatctgacagtgtatggtgtactag gtattgtacagggtaagttaacacctcaaattaccaagtaccgataa |
|
Protein
| Protein ID | pfu_aug2.0_2568.1_28865.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2568.1_28865.t1 MFPGHGSNLVTMRLVMVVVTVLSLLPESAQLVTPESAVKYTQCTQIVVVVIVDLTQGLSREDNPHEGPVVFVVKCCVRIT TFLLAAILTQVERMSGLVTSAVQFLFWILLTLCNIVPFYTKIILQWLASFDTMFPGHGSNLVTMRLVMVVVTVLSLLPES AQLVTPESAVKYTQCSQIVVVVIVDLTQGLSREDNPHEGPVVFVVKCCVRITTFLLAAILTQVERMSGLVTSAVQFLFWI LLTLCNIVPFYTKIILQTHQVDLFDFIVFQITYAFIIVQTLLFCWAEPSPEPKANDDGKRVCPEMESSILNRLYFWWMNK IVVTAYRKTITEDDIWALNTDDRSETLVPRFQTNWQKEVSKHQQVIVLITYADNRGTQPLWTSYVAAIALFVAALVQSVF YHQNYHIGMTIGMRIRCSLIAAIYKKALTLSSQAKKAFTLGEVVNLMSVDCQRIQDTFTFAWSLMTCPVQLTIGIYLLWG VLGPSCLAGLAVLVLMVPLNSYIVVKQRKLQSKVLFLKGKRIKLMNEILNGMKVLKMYTWEPSFQQQVNDIRDQELVLLR KIAYLQGGSTFCWILAPFLVTLATFVTYVLVSEDHFLDARKAFVSLSLFNILRLPINLMSQTISLMVQMSLAPFAFYTLF DKSHYMDANEMFVSLSVFSILKTPMNLTSSTIGRMTQAWVSVKRIQFFLSGKDLDPDNVKHSIASDYAIEMEHGTFTWDP DSSTSSLKDINLRVPESQLVAVVGQVGCGKSSLISALLGEMDKTDGRVNVKGSVAYVPQEAWIQNATLMDNVLFGKPYLQ KKYKKVIDACALTPDLDILPGRDLTEIGEKGINISGGQKQRVSLARAVYSNSDIYLMDDPLSAVDSHVGKHIFEKVIGPK GLLKNKTRVLVTHGVHWLPMVDVVVVMVNGRISEMGTYNQLITHDGPFAQFLKQYFMAEEESEAEEDPDIMRIKEKMMEQ VESVTSEGITSDTDGQTRLGIRRRSRVSSTKKPGELPNKSPDPPKPQRLTTDETSQEGEIKWSVFGDYARSMGTLITIFV LVVFSAYHATSVFANYWLTYWTEDEFLSNTSNSPSTDEYQSLSNYYLTVYGVLGIVQGKLTPQITKYR |
|