Gene
| Gene Model ID | pfu_aug2.0_257.1_23750 |
|---|---|
| Locus | scaffold257.1 : 71726 ... 75510 : + |
| To GenomeBrowser | scaffold257.1:71726..75510 |
| Genes list of scaffold | scaffold257.1 |
| Synonym | pfu_aug1.0_2993.1_30316 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_257.1_23750.t1 | 3 | 1 | PP1c_bdg | 133 | 191 | 3.1e-12 | 46.2 | 0.038 | 570.0 | -0.6 |
| pfu_aug2.0_257.1_23750.t1 | 3 | 2 | PP1c_bdg | 238 | 373 | 3.1e-12 | 46.2 | 1.0 | 15000.0 | -7.9 |
| pfu_aug2.0_257.1_23750.t1 | 3 | 3 | PP1c_bdg | 318 | 588 | 3.1e-12 | 46.2 | 2.1e-16 | 3.1e-12 | 46.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_257.1_23750.t1 | gi|676466674|ref|XP_009057641.1| | hypothetical protein LOTGIDRAFT_233378 [Lottia gigantea] | 6.0e-11 |
| pfu_aug2.0_257.1_23750.t1 | gi|240953829|ref|XP_002399694.1| | hypothetical protein IscW_ISCW015696 [Ixodes scapularis] | 3.0e-09 |
| pfu_aug2.0_257.1_23750.t1 | gi|642925975|ref|XP_967431.2| | PREDICTED: uncharacterized protein LOC655776 [Tribolium castaneum] | 1.0e-08 |
| pfu_aug2.0_257.1_23750.t1 | gi|270008970|gb|EFA05418.1| | hypothetical protein TcasGA2_TC015594 [Tribolium castaneum] | 1.0e-08 |
| pfu_aug2.0_257.1_23750.t1 | gi|505829858|ref|XP_004610228.1| | PREDICTED: protein phosphatase 1 regulatory subunit 15B [Sorex araneus] | 2.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_257.1_23750.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23750.t1 atgggaatgtcaactctaatcaataagggaaacttcctgggtagacagagtctttgtgctaacaaacaacatagtaatag aggaggacatttcaatgatctgagttacgcttgttctgtgggtaacgattcaagctttcaagtaccaaaaatggagatgc cattatttggagtccttgcaggactgaaaatgcaagaacaaacatttaataaggaatgtcatatgaacattccaaacaaa ccatttcccttcaacgcccagtgctttcagtttcatccctccataaaaagtactattactcataatccctcagtatcata taacaccactgccatggaaaatgcacaaaagaaattaaaatcaaacacatttggctgctttaagaattttcctgtttcca agaaaagaaatcgttataatcgatacaactggcaattaccaccaaaagctgacaagtcgagagtaacagatacacctagt gatactaccagtaatgagaaaattcagcagtcatctgtgccaaaacaaaagcatactgtaagagtatgtgtcaaacttca acaggaaaaatctgggtccttgggaaataaagttaaacttcaacaggcaaaatctgagcccttggaaagtaaaaagggtt tggatgcacacattactactcaaatggggcatcttagcttgggtgaaaaagttgctttggaaaatgcaaagaacacagct ttgaagaccagtcctgaatcagaaagtgaaattgattggttcagtatgtctaggcaaaattcagagaaagaacttccatc tctttcattgatgaattgcggagatgaagattcagatgataacatgtgcaatattagtgatgaagtcagggatttattca gctgttgtgattctcagagtaagccttgtgatgtggtagagaataggaatgatactgataaaaaagaacctgatatgaag acatcacaatcggagcaacaagttcagttacctggcgatatctctgtgaagaacatggacagagtgacagaatcagcagg aagcagtcacaagaatgagacaattgattcagtcgaatcagaaagaagtaaaatgtcaattcctatggtgctttatgtga gggacaataaaaaagcacgctcctccaagaaaaagaggagaaagcgtgaaaagaaatcaaatgtagaacagcatgcaaag aataacacaaattttgtgggcagtgacattgataacaagaaacggaaatttgacattttctcagagacatatcattcctc tagtgctggatctagtccaatgaatgttcactcttttttaattgctttcaatgatgaaggagcaaacagctcagatggtg agattgattggtctgatgatgatgacggtgatgatgatgaatgtgatgcagacttcttgtcagtttctagttttacatgt cctctaagtctaaatgtcatatgcgctgttagtagaccagaaagtcccaaatcttccaacacagaacttgaagctgtgaa ttcagcgtggaaaataaatatccaactaaacgcaagccctaagaagcagtgcaagtctgacaaaaaggtccactttccta gtgatgacaacttgactgaagtacacacggcaggagactggtgtcgcaagggccagtgggaggagtttgctcgggataga atgagatttgctcaacgaattcaagacttggaatccatcatttctccagtgctacaagcagatcatagacagaaaataag aaatcttctctccaaatag |
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Protein
| Protein ID | pfu_aug2.0_257.1_23750.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23750.t1 MGMSTLINKGNFLGRQSLCANKQHSNRGGHFNDLSYACSVGNDSSFQVPKMEMPLFGVLAGLKMQEQTFNKECHMNIPNK PFPFNAQCFQFHPSIKSTITHNPSVSYNTTAMENAQKKLKSNTFGCFKNFPVSKKRNRYNRYNWQLPPKADKSRVTDTPS DTTSNEKIQQSSVPKQKHTVRVCVKLQQEKSGSLGNKVKLQQAKSEPLESKKGLDAHITTQMGHLSLGEKVALENAKNTA LKTSPESESEIDWFSMSRQNSEKELPSLSLMNCGDEDSDDNMCNISDEVRDLFSCCDSQSKPCDVVENRNDTDKKEPDMK TSQSEQQVQLPGDISVKNMDRVTESAGSSHKNETIDSVESERSKMSIPMVLYVRDNKKARSSKKKRRKREKKSNVEQHAK NNTNFVGSDIDNKKRKFDIFSETYHSSSAGSSPMNVHSFLIAFNDEGANSSDGEIDWSDDDDGDDDECDADFLSVSSFTC PLSLNVICAVSRPESPKSSNTELEAVNSAWKINIQLNASPKKQCKSDKKVHFPSDDNLTEVHTAGDWCRKGQWEEFARDR MRFAQRIQDLESIISPVLQADHRQKIRNLLSK |
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