Gene
| Gene Model ID | pfu_aug2.0_257.1_23752 |
|---|---|
| Locus | scaffold257.1 : 140531 ... 146345 : - |
| To GenomeBrowser | scaffold257.1:140531..146345 |
| Genes list of scaffold | scaffold257.1 |
| Synonym | pfu_aug1.0_9996.1_60718 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_257.1_23752.t1 | 10 | 1 | LRR_8 | 143 | 174 | 2.3e-32 | 110.5 | 8.4e-05 | 0.066 | 12.9 |
| pfu_aug2.0_257.1_23752.t1 | 9 | 1 | LRR_4 | 145 | 174 | 1.6e-36 | 123.3 | 2.0e-07 | 0.00016 | 21.2 |
| pfu_aug2.0_257.1_23752.t1 | 13 | 1 | LRR_1 | 146 | 161 | 9.7e-20 | 67.5 | 0.019 | 15.0 | 6.1 |
| pfu_aug2.0_257.1_23752.t1 | 12 | 1 | LRR_7 | 147 | 157 | 1.6e-08 | 33.3 | 0.61 | 470.0 | 1.8 |
| pfu_aug2.0_257.1_23752.t1 | 13 | 2 | LRR_1 | 166 | 178 | 9.7e-20 | 67.5 | 0.11 | 84.0 | 3.8 |
| pfu_aug2.0_257.1_23752.t1 | 12 | 2 | LRR_7 | 166 | 177 | 1.6e-08 | 33.3 | 0.6 | 470.0 | 1.8 |
| pfu_aug2.0_257.1_23752.t1 | 10 | 2 | LRR_8 | 190 | 230 | 2.3e-32 | 110.5 | 5.4e-09 | 4.2e-06 | 26.4 |
| pfu_aug2.0_257.1_23752.t1 | 9 | 2 | LRR_4 | 195 | 230 | 1.6e-36 | 123.3 | 3.5e-11 | 2.8e-08 | 33.2 |
| pfu_aug2.0_257.1_23752.t1 | 10 | 3 | LRR_8 | 195 | 253 | 2.3e-32 | 110.5 | 4.3e-13 | 3.4e-10 | 39.5 |
| pfu_aug2.0_257.1_23752.t1 | 12 | 3 | LRR_7 | 195 | 211 | 1.6e-08 | 33.3 | 0.005 | 3.9 | 8.0 |
| pfu_aug2.0_257.1_23752.t1 | 13 | 3 | LRR_1 | 196 | 213 | 9.7e-20 | 67.5 | 0.0025 | 2.0 | 8.7 |
| pfu_aug2.0_257.1_23752.t1 | 9 | 3 | LRR_4 | 218 | 258 | 1.6e-36 | 123.3 | 3.1e-11 | 2.4e-08 | 33.3 |
| pfu_aug2.0_257.1_23752.t1 | 10 | 4 | LRR_8 | 218 | 276 | 2.3e-32 | 110.5 | 2.8e-12 | 2.2e-09 | 36.9 |
| pfu_aug2.0_257.1_23752.t1 | 12 | 4 | LRR_7 | 218 | 231 | 1.6e-08 | 33.3 | 0.0096 | 7.5 | 7.2 |
| pfu_aug2.0_257.1_23752.t1 | 13 | 4 | LRR_1 | 219 | 240 | 9.7e-20 | 67.5 | 0.0014 | 1.1 | 9.5 |
| pfu_aug2.0_257.1_23752.t1 | 12 | 5 | LRR_7 | 241 | 257 | 1.6e-08 | 33.3 | 0.1 | 79.0 | 4.1 |
| pfu_aug2.0_257.1_23752.t1 | 13 | 5 | LRR_1 | 242 | 259 | 9.7e-20 | 67.5 | 0.0036 | 2.8 | 8.3 |
| pfu_aug2.0_257.1_23752.t1 | 9 | 4 | LRR_4 | 265 | 296 | 1.6e-36 | 123.3 | 9.0e-06 | 0.007 | 15.9 |
| pfu_aug2.0_257.1_23752.t1 | 10 | 5 | LRR_8 | 265 | 295 | 2.3e-32 | 110.5 | 0.005 | 3.9 | 7.2 |
| pfu_aug2.0_257.1_23752.t1 | 13 | 6 | LRR_1 | 266 | 283 | 9.7e-20 | 67.5 | 0.062 | 48.0 | 4.5 |
| pfu_aug2.0_257.1_23752.t1 | 12 | 6 | LRR_7 | 266 | 280 | 1.6e-08 | 33.3 | 0.76 | 590.0 | 1.5 |
| pfu_aug2.0_257.1_23752.t1 | 10 | 6 | LRR_8 | 321 | 346 | 2.3e-32 | 110.5 | 0.017 | 13.0 | 5.6 |
| pfu_aug2.0_257.1_23752.t1 | 9 | 5 | LRR_4 | 330 | 346 | 1.6e-36 | 123.3 | 0.44 | 350.0 | 0.9 |
| pfu_aug2.0_257.1_23752.t1 | 13 | 7 | LRR_1 | 331 | 346 | 9.7e-20 | 67.5 | 0.75 | 590.0 | 1.2 |
| pfu_aug2.0_257.1_23752.t1 | 9 | 6 | LRR_4 | 352 | 389 | 1.6e-36 | 123.3 | 2.4e-07 | 0.00019 | 20.9 |
| pfu_aug2.0_257.1_23752.t1 | 10 | 7 | LRR_8 | 352 | 408 | 2.3e-32 | 110.5 | 2.6e-08 | 2.0e-05 | 24.2 |
| pfu_aug2.0_257.1_23752.t1 | 13 | 8 | LRR_1 | 352 | 368 | 9.7e-20 | 67.5 | 0.00019 | 0.15 | 12.1 |
| pfu_aug2.0_257.1_23752.t1 | 12 | 7 | LRR_7 | 352 | 366 | 1.6e-08 | 33.3 | 0.072 | 56.0 | 4.5 |
| pfu_aug2.0_257.1_23752.t1 | 13 | 9 | LRR_1 | 374 | 395 | 9.7e-20 | 67.5 | 0.00051 | 0.4 | 10.8 |
| pfu_aug2.0_257.1_23752.t1 | 12 | 8 | LRR_7 | 374 | 389 | 1.6e-08 | 33.3 | 0.052 | 41.0 | 5.0 |
| pfu_aug2.0_257.1_23752.t1 | 9 | 7 | LRR_4 | 397 | 435 | 1.6e-36 | 123.3 | 4.5e-09 | 3.5e-06 | 26.4 |
| pfu_aug2.0_257.1_23752.t1 | 10 | 8 | LRR_8 | 398 | 454 | 2.3e-32 | 110.5 | 2.2e-09 | 1.7e-06 | 27.6 |
| pfu_aug2.0_257.1_23752.t1 | 13 | 10 | LRR_1 | 398 | 417 | 9.7e-20 | 67.5 | 0.56 | 440.0 | 1.6 |
| pfu_aug2.0_257.1_23752.t1 | 12 | 9 | LRR_7 | 398 | 412 | 1.6e-08 | 33.3 | 0.013 | 10.0 | 6.8 |
| pfu_aug2.0_257.1_23752.t1 | 9 | 8 | LRR_4 | 419 | 454 | 1.6e-36 | 123.3 | 2.9e-08 | 2.3e-05 | 23.9 |
| pfu_aug2.0_257.1_23752.t1 | 13 | 11 | LRR_1 | 420 | 440 | 9.7e-20 | 67.5 | 0.0035 | 2.8 | 8.3 |
| pfu_aug2.0_257.1_23752.t1 | 12 | 10 | LRR_7 | 420 | 435 | 1.6e-08 | 33.3 | 0.003 | 2.4 | 8.7 |
| pfu_aug2.0_257.1_23752.t1 | 9 | 9 | LRR_4 | 442 | 480 | 1.6e-36 | 123.3 | 7.5e-07 | 0.00059 | 19.4 |
| pfu_aug2.0_257.1_23752.t1 | 10 | 9 | LRR_8 | 443 | 491 | 2.3e-32 | 110.5 | 9.3e-08 | 7.3e-05 | 22.4 |
| pfu_aug2.0_257.1_23752.t1 | 13 | 12 | LRR_1 | 443 | 462 | 9.7e-20 | 67.5 | 0.11 | 87.0 | 3.7 |
| pfu_aug2.0_257.1_23752.t1 | 12 | 11 | LRR_7 | 443 | 458 | 1.6e-08 | 33.3 | 0.29 | 230.0 | 2.7 |
| pfu_aug2.0_257.1_23752.t1 | 13 | 13 | LRR_1 | 467 | 482 | 9.7e-20 | 67.5 | 0.02 | 16.0 | 6.0 |
| pfu_aug2.0_257.1_23752.t1 | 12 | 12 | LRR_7 | 468 | 481 | 1.6e-08 | 33.3 | 0.036 | 28.0 | 5.5 |
| pfu_aug2.0_257.1_23752.t1 | 1 | 1 | Miro | 546 | 664 | 1.4e-12 | 48.1 | 4.4e-15 | 3.4e-12 | 46.8 |
| pfu_aug2.0_257.1_23752.t1 | 1 | 1 | Ras | 546 | 682 | 2.3e-09 | 36.8 | 6.1e-12 | 4.8e-09 | 35.8 |
| pfu_aug2.0_257.1_23752.t1 | 10 | 10 | LRR_8 | 830 | 842 | 2.3e-32 | 110.5 | 8.9 | 7000.0 | -3.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_257.1_23752.t1 | gi|524892078|ref|XP_005102570.1| | PREDICTED: malignant fibrous histiocytoma-amplified sequence 1 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_257.1_23752.t1 | gi|260812954|ref|XP_002601185.1| | hypothetical protein BRAFLDRAFT_214496 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_257.1_23752.t1 | gi|260793210|ref|XP_002591605.1| | hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_257.1_23752.t1 | gi|260812958|ref|XP_002601187.1| | hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_257.1_23752.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23752.t1 atggacatgttaaaaaaggcgcggtttgagaggaattcggagggtagaaatgcctccaatagtaagtccccgaaagggag cccctcccgaagcaggagtaatagcaaaagtccaaaaagacggggatcatcacagtcaaaagccatgtctaactcctcct cgccgactagaaatgcacctgggtcaggcaaaaccaggtcatcttctggaagaaagggatccaagagtccatctccaaac agacgaaccaaaagtccttcctcttctaaacctgactccggagacagcaggggacggtctgccaagaaaacaaaagggcc agtccggattaggtccccggacagaactgaaaacggactcaaagtccgagatttctctgaccaaggactgaccgttatgc cgcaaaccttgctacaagaaaaggatctaggaatagtgaacttatccggtaacaatttaaaaggtcttcctcccgagatt caaagatgggacactctggaaaaacttgatctcagcaagaactacggtttacgtcgtaccaaggcaaacgattccagctt acctcgtgaaatccttttgttgccaaatctacgggaacttgtcctgtcagaatgtaacatgcaaagactgccacctatat tgtggcaaatgaccaacctgcaggtgctcgacattagcaggaacaaaatcaacgttctggtacctgaggtggggaacttg agtaacctccgcaagatcaacctgaagcatactaacataacaaccctaccaccagaaatagtgtactgtcaagaactaga ggaaatactgctttggggaaacaaaatcgaaactctaccagaaactctacccgagttactgaaactaaagactctagctt taaactatcgggatttctgcaaactcgccgaccagtacatggaatcattcattaataaaggacaaataaaatctgaacat atacctaggatcgttttcatgctccccgcgcttcaatcaatggatctggagtgtacaaaaattaacaatctaccagagac tactaatttaggccttcaggagttgaatctgagtcggaatttcctacaagttctaccagatagtgtttacactctgaacc atctaacattactgaacttgtctgataaccagttctcaaatcttccaaacgaagtaggaaatttgaaaacactagtcaag ttgagagttgcaaaaaatcagcttacgcagttaccaataaccataggaaagttgaagaacctgaaagaactagatgcatc agataataaattgaaacgtctccctacacaaataagaggacttaaaagtctgaaagtgatgcatctagaaaacaatgaac tcgttggtttacccgacgaaatttgtgaattgactgacatcgagacactgaatgtgtctgataataatatacacacactg ccaatgaaacttcaccagctggtccacctaaaagacgcgcatgtgtacgacagatattacaagaaaggactgtggctttt caaaaatcctttgacacaaccaccaaaagaaatatggagagcggataaaacggacgccatattcaaatatctaaaggaat tggcaatcatcaagacacagaatctacaaagacagaaaatgttgatgatcggagaatcagggtgtggcaagacttctctg gttcaggcactattgcatggaaagtccctgagcgaggaggaagatggagcacatataaagacctcgtatgtggaacaatc catctggaaaacgaaaaatttggtagaatacttgatcaacgacttcggtggcgacgatacctataatcttgggtattcac tgttcttagatgccaaagctttggtgactttagtttacgatcatagtaagtataaaaccgaaaaccatcaggattctgtc ggctgctggttggacatgttgaataaatatgctcctggagtcgtcgtcaaactgataggcactaagaccgacctgatcga agacgaggcgattgtagatatcaaagcagaactagtcatgtcagagattgagcgtcaacagcagacgtacgagttaagac tccaacaagaactgagaaggatccagaaagacatcaaagaagctgaagcaagtcatgctaccgaacttctacagcatctc acggcaaacaaggccaagattgaaaagctgctcagcaaaccactacggataatgccagatatctctatggtgtcatcaaa ggagggtctcatgggattacccgaccttgtcaacagcttagagctcctggccataaacaaggatctgttcccacatggac aacgcgctgtcccagaattatggtgcaaatttcgctataaacttaaacggcaaccaggattttacctccaatggtcaaaa gtcgagagccttgcagaaaagatgaacttaatttacggtgatatgcaagcatgcatgagataccttggtgatataggtga actcttgtggttccagggtatacccggactatcccatatcatatttcacaaaccgcgtcaccttatatcaatagtcacat ctctctaccgtcacaatgtgaaggagtatctcgactttgagcaaaacaaaattttcatgagtttcggcaaattcacaaca gaaacattccagatggccactgaaatattctacaattttggccaagtttcgcgacctctccttgcgtgtttctggtccga gcacatgcttaacaatgaccagtttaccgaacttcttgaactgacccctaacctgggaatatgttatactatcccagaac cagaggtgccgatggggacaaatgtggcccttccattgatggtccttccttggtacaacaaagaggcagcggacaacagt gttgttgaaacctttgtcggtgaagttcctgaaggtggaactattttacaaatacattatgtctttccatttggaatgcc taagagcatatttcataaactatcaactgcagtgcaggaaaacatactttcaagaatagactggagtaacgcattatttg ctacaattgaagaagccagcttcttgataatatactactcaaagcaagaacatactgatcagagtaaccttgagcaaggt gaaatgcctcaaaatgcaggtcaaggtgatttgattcggattatgtttaagggcgagaacgaagccgctgcagaggaagc cattatgaaggtgacccagagtgtagctagtgtgttagaacgtgtcaatggacttgtctggaagatagaggctccgggta aactatggaagaatagagttatacgtctggaggaggaaagagccgatttaggcaagagagaaaatagcttttag |
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Protein
| Protein ID | pfu_aug2.0_257.1_23752.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23752.t1 MDMLKKARFERNSEGRNASNSKSPKGSPSRSRSNSKSPKRRGSSQSKAMSNSSSPTRNAPGSGKTRSSSGRKGSKSPSPN RRTKSPSSSKPDSGDSRGRSAKKTKGPVRIRSPDRTENGLKVRDFSDQGLTVMPQTLLQEKDLGIVNLSGNNLKGLPPEI QRWDTLEKLDLSKNYGLRRTKANDSSLPREILLLPNLRELVLSECNMQRLPPILWQMTNLQVLDISRNKINVLVPEVGNL SNLRKINLKHTNITTLPPEIVYCQELEEILLWGNKIETLPETLPELLKLKTLALNYRDFCKLADQYMESFINKGQIKSEH IPRIVFMLPALQSMDLECTKINNLPETTNLGLQELNLSRNFLQVLPDSVYTLNHLTLLNLSDNQFSNLPNEVGNLKTLVK LRVAKNQLTQLPITIGKLKNLKELDASDNKLKRLPTQIRGLKSLKVMHLENNELVGLPDEICELTDIETLNVSDNNIHTL PMKLHQLVHLKDAHVYDRYYKKGLWLFKNPLTQPPKEIWRADKTDAIFKYLKELAIIKTQNLQRQKMLMIGESGCGKTSL VQALLHGKSLSEEEDGAHIKTSYVEQSIWKTKNLVEYLINDFGGDDTYNLGYSLFLDAKALVTLVYDHSKYKTENHQDSV GCWLDMLNKYAPGVVVKLIGTKTDLIEDEAIVDIKAELVMSEIERQQQTYELRLQQELRRIQKDIKEAEASHATELLQHL TANKAKIEKLLSKPLRIMPDISMVSSKEGLMGLPDLVNSLELLAINKDLFPHGQRAVPELWCKFRYKLKRQPGFYLQWSK VESLAEKMNLIYGDMQACMRYLGDIGELLWFQGIPGLSHIIFHKPRHLISIVTSLYRHNVKEYLDFEQNKIFMSFGKFTT ETFQMATEIFYNFGQVSRPLLACFWSEHMLNNDQFTELLELTPNLGICYTIPEPEVPMGTNVALPLMVLPWYNKEAADNS VVETFVGEVPEGGTILQIHYVFPFGMPKSIFHKLSTAVQENILSRIDWSNALFATIEEASFLIIYYSKQEHTDQSNLEQG EMPQNAGQGDLIRIMFKGENEAAAEEAIMKVTQSVASVLERVNGLVWKIEAPGKLWKNRVIRLEEERADLGKRENSF |
|