Gene
| Gene Model ID | pfu_aug2.0_257.1_23757 |
|---|---|
| Locus | scaffold257.1 : 253390 ... 257727 : - |
| To GenomeBrowser | scaffold257.1:253390..257727 |
| Genes list of scaffold | scaffold257.1 |
| Synonym | pfu_aug1.0_12916.1_46570 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_257.1_23757.t1 | 1 | 1 | RHINO | 2 | 274 | 2.5e-15 | 56.9 | 2.5e-17 | 3.7e-13 | 49.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_257.1_23757.t1 | gi|676454934|ref|XP_009053842.1| | hypothetical protein LOTGIDRAFT_232030 [Lottia gigantea] | 7.0e-12 |
| pfu_aug2.0_257.1_23757.t1 | gi|260827084|ref|XP_002608495.1| | hypothetical protein BRAFLDRAFT_126635 [Branchiostoma floridae] | 4.0e-08 |
| pfu_aug2.0_257.1_23757.t1 | gi|291223959|ref|XP_002731976.1| | PREDICTED: uncharacterized protein LOC100367503 [Saccoglossus kowalevskii] | 9.0e-08 |
| pfu_aug2.0_257.1_23757.t1 | gi|632973748|ref|XP_007903304.1| | PREDICTED: RAD9, HUS1, RAD1-interacting nuclear orphan protein 1 [Callorhinchus milii] | 5.0e-07 |
| pfu_aug2.0_257.1_23757.t1 | gi|719749160|ref|XP_010212333.1| | PREDICTED: RAD9, HUS1, RAD1-interacting nuclear orphan protein 1 [Tinamus guttatus] | 4.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_257.1_23757.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23757.t1 atgcctaggaaacgtcgtaagtcatgtgtgaataaagaacctttgatcttcactgaaagtccagtgagtaagcagagaaa tttaccaacacctgtatactgtgctagacacccagccactgtgtgtagtgtaccagtagaggaagcaacaagctttactt gggtttctccccagttcaggtcagctcctgccagtgctaaaggacttaggagaagtcgacgtcgtaagaaaagcctatct gggccagccattcaaaagccatgtacttgtcatcatggattgtcagtaaattctgcgagtaaaacaggaagcagaaaatc aaaattcaaaccattactgtttatgggtgatgatactccgggtcaaactgtcatccaggacattgatgtaacagatgatt cttgtatgaacggcgatttagatcattcaagaaatgtaactgaaacgggtaaaggcaaggggagaagatgtagtcctcgt aatgccaaaactgctgtcaatgactcggtgtgctgtgataatgacctttcttatttatcggtttctactcctggtcatga ccaggaaaacatcgctccatccaatcaaaacctgtgttcaaatcaacctcctgtgaaaaacttattctgtgacatgaata atgcgacaagtcctaaaatgagacctaaaaatagacataaaaatgtaaggtcaaggttattacagaatttagaagcatcc gtaagtgaggattggtcacaaaggacaatgttaatatcggaccatgtgctagtaccagacactccagaggctgaatatgg catgtgtaatagactcaggcggcttaaacgtcataaacatcgaggaaaaaattaa |
|
Protein
| Protein ID | pfu_aug2.0_257.1_23757.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23757.t1 MPRKRRKSCVNKEPLIFTESPVSKQRNLPTPVYCARHPATVCSVPVEEATSFTWVSPQFRSAPASAKGLRRSRRRKKSLS GPAIQKPCTCHHGLSVNSASKTGSRKSKFKPLLFMGDDTPGQTVIQDIDVTDDSCMNGDLDHSRNVTETGKGKGRRCSPR NAKTAVNDSVCCDNDLSYLSVSTPGHDQENIAPSNQNLCSNQPPVKNLFCDMNNATSPKMRPKNRHKNVRSRLLQNLEAS VSEDWSQRTMLISDHVLVPDTPEAEYGMCNRLRRLKRHKHRGKN |
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