Gene
| Gene Model ID | pfu_aug2.0_257.1_23758 |
|---|---|
| Locus | scaffold257.1 : 267778 ... 279766 : + |
| To GenomeBrowser | scaffold257.1:267778..279766 |
| Genes list of scaffold | scaffold257.1 |
| Synonym | pfu_aug1.0_10631.1_17657 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| forkhead box protein m1 | GO:0005488 GO:0006357 GO:0044763 GO:0048522 GO:0048523 GO:0051716 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_257.1_23758.t1 | 3 | 1 | Fork_head | 481 | 539 | 1.5e-11 | 44.1 | 0.16 | 2300.0 | -1.4 |
| pfu_aug2.0_257.1_23758.t1 | 3 | 2 | Fork_head | 570 | 605 | 1.5e-11 | 44.1 | 0.2 | 3000.0 | -1.7 |
| pfu_aug2.0_257.1_23758.t1 | 3 | 3 | Fork_head | 747 | 794 | 1.5e-11 | 44.1 | 1.0e-15 | 1.5e-11 | 44.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_257.1_23758.t1 | gi|498974801|ref|XP_004548470.1| | PREDICTED: forkhead box protein M1 isoform X1 [Maylandia zebra] | 3.0e-15 |
| pfu_aug2.0_257.1_23758.t1 | gi|498974805|ref|XP_004548471.1| | PREDICTED: forkhead box protein M1 isoform X2 [Maylandia zebra] | 3.0e-15 |
| pfu_aug2.0_257.1_23758.t1 | gi|734629129|ref|XP_010742838.1| | PREDICTED: forkhead box protein M1 [Larimichthys crocea] | 4.0e-15 |
| pfu_aug2.0_257.1_23758.t1 | gi|545546758|ref|XP_005637353.1| | PREDICTED: forkhead box protein M1 isoform X7 [Canis lupus familiaris] | 5.0e-15 |
| pfu_aug2.0_257.1_23758.t1 | gi|742192159|ref|XP_010890915.1| | PREDICTED: forkhead box protein M1 isoform X2 [Esox lucius] | 5.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_257.1_23758.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23758.t1 atgagagagatgtcacaaaaacctattctcaaagatgatggcatgaataagcaacactccaatgattctagggataactc agttcagagcatagatgatggtaatacatatgttgtgattctaagccaaggaaataacgatacatacaagaatgcaagag agccacaatttatcaactcaaagtctgttggcatgcttggaatactcagcaatgattgttcaccaatgcctaggcgtaat cttattcctcacattcagggagatgaaattagactgaaccttaatcatggctttgataattatgacagctcaaattcatc tttaaaggtattcaatgatgatcagagtgagagcgttgatgaaggttttagggatgtttctcaacggaagatgcatatca caatacccaaagtaagacatgtaattgcagacccgtctgtccatagagattttagtccaagtggggcatatgttgtttac ggaactcctcatagtgatttgagcgagaacagtttatacgatactcggggatcatctggttatgtctcagatcttgtcac tctgaaggattcatatgaaaccccaaatgctcaagctcctgtagccaaacacccagcatcaagacagatattcctcgtcc atcaagctcagtcaggtgcaaatagtgatagaggtactccaacctcacttaaacatgtaaaagaccctataaaatcactt caaaagcagcaaacagtcacaaagcagcaagttcctgttctgacacatacccctcatgtaatacctgctacattttctgt ggccaagtcctcgtatcttacatctacacctaactcaggagtggtcatacagtctggcagaaatagttatatagtacctg attctgatgcacagagttctttttctgatgtcaacgtagtgccagatgttgaatatcacacacctagtggtagtaaagtc actttatcatccaaatccatcccgcaacttgtgaatacatgtaaattcaaaggaaaaagtaagaattcattcatcagagg tcaagcaaattcatctaatattttggatggcaatgaaaaagacagttcagaaaatggtgaaaattcaagtgagtcaatga tcccattggattcagcaacatctctaaatcaaagtgggcatgacaagcttactacagatagttcccaacagcagttgccc tttcaaagaagctcacgagttggagatgttgtcgtccatgtgagggtggaaaactcttttagtgctgtagaagtagactg tgacaatagcataaatcaaagtgaagttaaaactctacaagatgtaacaaatggcaatactgacagacctttaccagagg aacagagcatgtttcagaatacaagtagaaggctcagccagccaacagatctcatggggtgtatagagaacctgccgcct tatggacacttaccaaaccatgccatacgaaaaaacaggaatcatacacatccaagtcagagcgcctacaaaaggatatc aggaacttcctcaaataggagacgtaccagtagtgctacacagaaccaagcttnttgtgacaatagcacaaatcaaagtg atgttaaaactctgcaagatgtaacaaatggcaatactgacagacctttaccagagggtaaaagtgacataactcaggca caagatggtaaaaatggtgcttatatggctagctatccgttttataactttaatcctcatgattatattcacatgacaaa taactttgcaatgagtatgtcagaacagagcatgtttcagaatacaagtagaaggctcagccagccaacagatctcatgg ggtgtatagagaacctgccgccttatggacacttaccaaaccatgccatacgaaaaaacaggaatcatacacatccaagt cagagctcctacaaaaggatatcaggaacttcctcaaataggagacgtaccagtagtgctacacagaaccaagcttgcct taactctcaagatgttatgacaacaaattctcaaagctccctcaacagtgaatcttcacataaaggggatgagttgaatg attcattgactagtatgcagtggctaagaggaatcaagcttaaacctgataaagacaaagctgaagtcagtaacagtaaa aaagatatgctcttacagtggcgccatctaggacagcaggaaattaaacagattgcagatgagtatggaaaaactaagcg accaccattttcatacatgacacttatccaaatggcattacacagtaaagatgataagcgaatgacattgcgtgaaatat gtagctggatagaagtcacattcccctactataaatacacggcaaagtcagggtggaaggttgcccatgacaagacctta caatctatgtggtaa |
|
Protein
| Protein ID | pfu_aug2.0_257.1_23758.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23758.t1 MREMSQKPILKDDGMNKQHSNDSRDNSVQSIDDGNTYVVILSQGNNDTYKNAREPQFINSKSVGMLGILSNDCSPMPRRN LIPHIQGDEIRLNLNHGFDNYDSSNSSLKVFNDDQSESVDEGFRDVSQRKMHITIPKVRHVIADPSVHRDFSPSGAYVVY GTPHSDLSENSLYDTRGSSGYVSDLVTLKDSYETPNAQAPVAKHPASRQIFLVHQAQSGANSDRGTPTSLKHVKDPIKSL QKQQTVTKQQVPVLTHTPHVIPATFSVAKSSYLTSTPNSGVVIQSGRNSYIVPDSDAQSSFSDVNVVPDVEYHTPSGSKV TLSSKSIPQLVNTCKFKGKSKNSFIRGQANSSNILDGNEKDSSENGENSSESMIPLDSATSLNQSGHDKLTTDSSQQQLP FQRSSRVGDVVVHVRVENSFSAVEVDCDNSINQSEVKTLQDVTNGNTDRPLPEEQSMFQNTSRRLSQPTDLMGCIENLPP YGHLPNHAIRKNRNHTHPSQSAYKRISGTSSNRRRTSSATQNQAXCDNSTNQSDVKTLQDVTNGNTDRPLPEGKSDITQA QDGKNGAYMASYPFYNFNPHDYIHMTNNFAMSMSEQSMFQNTSRRLSQPTDLMGCIENLPPYGHLPNHAIRKNRNHTHPS QSSYKRISGTSSNRRRTSSATQNQACLNSQDVMTTNSQSSLNSESSHKGDELNDSLTSMQWLRGIKLKPDKDKAEVSNSK KDMLLQWRHLGQQEIKQIADEYGKTKRPPFSYMTLIQMALHSKDDKRMTLREICSWIEVTFPYYKYTAKSGWKVAHDKTL QSMW |
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