Gene
| Gene Model ID | pfu_aug2.0_257.1_23761 |
|---|---|
| Locus | scaffold257.1 : 297008 ... 310868 : + |
| To GenomeBrowser | scaffold257.1:297008..310868 |
| Genes list of scaffold | scaffold257.1 |
| Synonym | pfu_aug1.0_10348.1_53526 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_257.1_23761.t1 | 3 | 1 | ATS3 | 170 | 286 | 1.7e-11 | 43.8 | 1.3e-05 | 0.096 | 12.2 |
| pfu_aug2.0_257.1_23761.t1 | 3 | 1 | PLAT | 177 | 292 | 0.0 | 203.2 | 2.6e-20 | 1.9e-16 | 60.4 |
| pfu_aug2.0_257.1_23761.t1 | 3 | 2 | ATS3 | 304 | 404 | 1.7e-11 | 43.8 | 1.5e-06 | 0.011 | 15.3 |
| pfu_aug2.0_257.1_23761.t1 | 3 | 2 | PLAT | 309 | 414 | 0.0 | 203.2 | 8.4e-27 | 6.2e-23 | 81.3 |
| pfu_aug2.0_257.1_23761.t1 | 3 | 3 | ATS3 | 435 | 502 | 1.7e-11 | 43.8 | 1.1e-05 | 0.079 | 12.5 |
| pfu_aug2.0_257.1_23761.t1 | 3 | 3 | PLAT | 438 | 518 | 0.0 | 203.2 | 5.5e-20 | 4.1e-16 | 59.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_257.1_23761.t1 | gi|524867187|ref|XP_005090406.1| | PREDICTED: lipoxygenase homology domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_257.1_23761.t1 | gi|195996277|ref|XP_002108007.1| | hypothetical protein TRIADDRAFT_52050 [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_257.1_23761.t1 | gi|449662219|ref|XP_002157592.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_257.1_23761.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23761.t1 atgcagcagcccttttctaattcagaagccgtaaaacgatgtatgaacatgccagatttaccattaagtggacagataag atacggtcctaggccaccctatgccacaaatagtgataaaccacgccaacgaccatactctgctcctgccagaaggttga caggtggccatgctgagccgtggagaagctctacataccaggaacctcgtatccctataccacgtcactatcatgtgaca ctaaaccatcgatctgatgaaacagactttagcagaaatgccccatatgcaccaaggaagatggagtctatatttggtcg taatggagatgttcgcagttccattcccctccctccatatagcccacttaatgacccccacttaaccgagtactttgaaa ggagatttggtgcaatccaggctgcagcagcttctaagcaaaggagacttttgtacagaagaccttcaagtgccacagga tcgtatgcagggagaagtagtaaaagaaaaaaggacgaggataccctgtataaagtagccgtcattactggtgataagaa aaatgccggaactgatgcaaaggtgttcctcacaataaaaggactgaaaggaaaaatacccaaaaccagattaaccaaaa aagctggatctgtcaaatctacaaagaaagtagcattccgatttgctaaaggaagcacacatctgtttaaaataagaggt cctgaaataggagaaatcaggtccattgttgtggagcatgatggtgtacagaaggatcaagcctggttcttacaggaagt agaaataattcacgtcaagaaaaagaaaagttggagttttatatgtaatcagtggttatcgttacatcatggtgaccaac acacatcacgggaactctttcctcagatggcctcaaaaacagagtatgagattgtaacagtcacaggtgacaagcagggg gctgctacaaatgccaacgtttatattacaatatttgggaaaactggtgctacctcaaaattaccactaaaagatcacac gaaaaagaacttccgtttgaactctagtgactcattcaaagtgcgaacaaactgtgtaggtcctatgaggaaaataagaa tagaacatgataacacaggaatgggtgcaggatggtatctagaaagggttgtaatcacagatttacagcatcctaagtgg aagtattactttccatgtggtcagtggctggccagagatgaaggtgatgggtccatatgtagatatcttataggcagcaa ggacccgtttgccatacgcaaagatagccaatacaaagtcagtgtgtacacaggggataagaaaggtgccggtacagatg ctaacgtctgtattacattgtttggtgaaaacggagactcaggagagatgaagctagacaacagtaaaaacaactttgaa agaaatgatgttgacgagtttatgttgagatgtccgtgcctggggaggatagagagattaaggataggtcacgataactc gggatttggaccgggctggtacctggaaaaggtagggcacagtggtaataggatggtactaatatttattagaatacttt aa |
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Protein
| Protein ID | pfu_aug2.0_257.1_23761.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23761.t1 MQQPFSNSEAVKRCMNMPDLPLSGQIRYGPRPPYATNSDKPRQRPYSAPARRLTGGHAEPWRSSTYQEPRIPIPRHYHVT LNHRSDETDFSRNAPYAPRKMESIFGRNGDVRSSIPLPPYSPLNDPHLTEYFERRFGAIQAAAASKQRRLLYRRPSSATG SYAGRSSKRKKDEDTLYKVAVITGDKKNAGTDAKVFLTIKGLKGKIPKTRLTKKAGSVKSTKKVAFRFAKGSTHLFKIRG PEIGEIRSIVVEHDGVQKDQAWFLQEVEIIHVKKKKSWSFICNQWLSLHHGDQHTSRELFPQMASKTEYEIVTVTGDKQG AATNANVYITIFGKTGATSKLPLKDHTKKNFRLNSSDSFKVRTNCVGPMRKIRIEHDNTGMGAGWYLERVVITDLQHPKW KYYFPCGQWLARDEGDGSICRYLIGSKDPFAIRKDSQYKVSVYTGDKKGAGTDANVCITLFGENGDSGEMKLDNSKNNFE RNDVDEFMLRCPCLGRIERLRIGHDNSGFGPGWYLEKVGHSGNRMVLIFIRIL |
|