Gene
| Gene Model ID | pfu_aug2.0_257.1_23763 |
|---|---|
| Locus | scaffold257.1 : 316798 ... 335292 : + |
| To GenomeBrowser | scaffold257.1:316798..335292 |
| Genes list of scaffold | scaffold257.1 |
| Synonym | pfu_aug1.0_10348.1_53528 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lipoxygenase homology domain-containing protein 1-like | GO:0007605 GO:0032420 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_257.1_23763.t1 | 12 | 1 | PLAT | 3 | 25 | 0.0 | 637.6 | 0.0063 | 31.0 | 4.9 |
| pfu_aug2.0_257.1_23763.t1 | 11 | 1 | ATS3 | 48 | 101 | 2.4e-24 | 85.3 | 1.3 | 6600.0 | -3.4 |
| pfu_aug2.0_257.1_23763.t1 | 12 | 2 | PLAT | 49 | 157 | 0.0 | 637.6 | 1.6e-20 | 8.1e-17 | 61.6 |
| pfu_aug2.0_257.1_23763.t1 | 11 | 2 | ATS3 | 168 | 199 | 2.4e-24 | 85.3 | 0.84 | 4200.0 | -2.8 |
| pfu_aug2.0_257.1_23763.t1 | 12 | 3 | PLAT | 181 | 215 | 0.0 | 637.6 | 1.8e-07 | 0.00091 | 19.5 |
| pfu_aug2.0_257.1_23763.t1 | 11 | 3 | ATS3 | 212 | 319 | 2.4e-24 | 85.3 | 3.2e-06 | 0.016 | 14.8 |
| pfu_aug2.0_257.1_23763.t1 | 12 | 4 | PLAT | 220 | 327 | 0.0 | 637.6 | 4.2e-19 | 2.1e-15 | 57.0 |
| pfu_aug2.0_257.1_23763.t1 | 11 | 4 | ATS3 | 347 | 433 | 2.4e-24 | 85.3 | 0.00025 | 1.2 | 8.7 |
| pfu_aug2.0_257.1_23763.t1 | 12 | 5 | PLAT | 349 | 455 | 0.0 | 637.6 | 1.3e-26 | 6.2e-23 | 81.3 |
| pfu_aug2.0_257.1_23763.t1 | 11 | 5 | ATS3 | 471 | 567 | 2.4e-24 | 85.3 | 1.3e-05 | 0.063 | 12.8 |
| pfu_aug2.0_257.1_23763.t1 | 12 | 6 | PLAT | 478 | 566 | 0.0 | 637.6 | 1.5e-21 | 7.5e-18 | 64.9 |
| pfu_aug2.0_257.1_23763.t1 | 11 | 6 | ATS3 | 682 | 774 | 2.4e-24 | 85.3 | 0.0023 | 11.0 | 5.5 |
| pfu_aug2.0_257.1_23763.t1 | 12 | 7 | PLAT | 684 | 790 | 0.0 | 637.6 | 9.1e-24 | 4.5e-20 | 72.1 |
| pfu_aug2.0_257.1_23763.t1 | 11 | 7 | ATS3 | 822 | 886 | 2.4e-24 | 85.3 | 0.014 | 69.0 | 3.0 |
| pfu_aug2.0_257.1_23763.t1 | 12 | 8 | PLAT | 831 | 900 | 0.0 | 637.6 | 3.6e-14 | 1.8e-10 | 41.1 |
| pfu_aug2.0_257.1_23763.t1 | 11 | 8 | ATS3 | 920 | 1016 | 2.4e-24 | 85.3 | 9.5e-05 | 0.47 | 10.0 |
| pfu_aug2.0_257.1_23763.t1 | 12 | 9 | PLAT | 928 | 1039 | 0.0 | 637.6 | 1.3e-20 | 6.6e-17 | 61.9 |
| pfu_aug2.0_257.1_23763.t1 | 11 | 9 | ATS3 | 1068 | 1187 | 2.4e-24 | 85.3 | 8.2e-07 | 0.0041 | 16.7 |
| pfu_aug2.0_257.1_23763.t1 | 12 | 10 | PLAT | 1079 | 1193 | 0.0 | 637.6 | 7.8e-25 | 3.8e-21 | 75.5 |
| pfu_aug2.0_257.1_23763.t1 | 11 | 10 | ATS3 | 1258 | 1325 | 2.4e-24 | 85.3 | 0.55 | 2700.0 | -2.2 |
| pfu_aug2.0_257.1_23763.t1 | 12 | 11 | PLAT | 1260 | 1374 | 0.0 | 637.6 | 3.0e-20 | 1.5e-16 | 60.7 |
| pfu_aug2.0_257.1_23763.t1 | 11 | 11 | ATS3 | 1387 | 1414 | 2.4e-24 | 85.3 | 0.48 | 2400.0 | -2.0 |
| pfu_aug2.0_257.1_23763.t1 | 12 | 12 | PLAT | 1392 | 1495 | 0.0 | 637.6 | 6.3e-19 | 3.1e-15 | 56.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_257.1_23763.t1 | gi|676448157|ref|XP_009051642.1| | hypothetical protein LOTGIDRAFT_208950 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_257.1_23763.t1 | gi|701429129|ref|XP_010003324.1| | PREDICTED: lipoxygenase homology domain-containing protein 1 [Chaetura pelagica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_257.1_23763.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23763.t1 atggttatagttgatgactgtgataacaacatagtgtatgagttcccatgtcagagatggctggcccgagacatggacga tggtcaaatatggagagatctactggtcaatgtcggacctacggctgctgcaccaggtataccatacgtaatcacagtac aaactggagatgaaatcaacgcaggtacgggggctcgtgtattcatcatgttgtatggcgggaagaataaggaggactgt agtggaaaaatctggcttgataatggcaagtttgaacgtgatcgtacggatatattcaacattgacatagcagcgctact aagtccacttgaaaagatagagataggacatgacaacagtggtataggcccaggatggttcctggaacaagtaatagtgt attgtcccacaactggtatagaacaatattttccgtgccgtaagtggtttgctaaagatagtggagacaagcagatccag cgtacattgtttgagcagacggcagtcaggaaaaagagggaaaaacgtataacatggtacgtgtgggtccacaccagcga tacgtctcttgctggcacagatgccaaggtcttcatgtgtgtgtatggagagaagggcaagtctgaggaaatacgactct caaataaagtggttaaataccaagtggaggtttacacagggaagaaatctggagcaggcactgatgctaatgtcttcttg accatatttggtgagttaggagacacaggcaggcgattcctgagacactcgtcaacaaatatcaacaagtttgagaaagg gcagtgtgatatgtttgagattgaggctgtgactctagagaagatttccaagattcaaatagggcatgatgggaagggaa tcggagctggttggtatctcgacaaagttgtcatcaaaaatccatcacagccaaaacacaatgtcacatttgaatgtttc tgttggcttgctgaggacgagggtacaggggagatagtgaaggagtttacagtgtcgggatcccagatgttaggaaaaac aacgtacaacgtccatgttaaaacaggagatgaacgttactcaggtacagatgccaatgtatacctgcagatatacggct ctaagggtgatactggagagcttcatctacgacaatcagaaaaccactctaacaagtttgagaggggtaaaactgatcac ttcaaattggaggccactgatataggaaagatcaagaagataaagattggccatgatggcaagaaccccgggtcaggttg gttcctggatgaggtccgtatcgacattccttcacgtggggagcagtacgtgtttgcttgtcacagatggctagacaaag acgaaggtgacgggttgatagagctcgaactagagccatcctggaaggaagacagggaaaaaacaataccgtatgaagta actgtatggacaggagataaacgaggagctgggacagatgcccgggttttcctacagatttatggtaaagatgggaggac agaggatatagaactagataacaagtcagataactttgagaggaacaaagtggacaagttcaagattgagggtaaagatg taggtcagattgtaaagataaggattggtcatgatggcaccagtatgggagacggctggtatctagacaagctactaatt cagaggaagcctcgcaaaccaacaaagaaacaaaaaggaaagaaacgaccaccttctgcagtagagagacggcagtctat cctagccgacaaaatgcagagtgacagtttagactctgatggcagtacctcatcttcaaccacacctagacgcaggaaga gtctcaagcggagaccttcagatctgtcggcagtgaaggaagagagtgaggaggaggaggcgtacgatgaacaagatgag acggaggattactggttctttgtagataaatggttcgccaagagtgaaggagataaacaaatagtacgagaacttatacc cacagataaagatggccgaccactcaaaggggcactagatgatgtggagtatatagttagagtatacacaggcactgtgt cgggagcaggaactgacgccaatgtatttataacattatatggtaaaacagattctggagagaggcaattaaaagagagt aacaaattcaacaaatttgagaatggacaggaggatatctttaaggtacaagccaaagaactaggtcctctgaccaaggt ccgaatccgccatgataacactggcctgctgggagctgcctggttcttagaccgcatagaagtagaggatacaaagaaaa agaaaacgtactacttcctgtgtcagagatggttggctactggggaagacgacggtcagatttgccgagaacttgtagcc gtggacaaagctctgataaccaagatggcaaattctaaagacgctgcaaggaaagaagttgccttagaaaccaaagctgc catgacaacataccatgtcaaggtcgttactggggatgtttttggtgcaggtactgatgccaatgtgttcttacgacttt ttggggatcaagacaacacagagaagatacctttgaaatcttccctcacgtacaaggataagtttgagagaaaccatact gatgagtttatactagaagttgtgaatattggggaactcagtaaagtcaaactaaaaggaaaaaggacaattttaanaaa aatagaacgagatttattcccacaagaacttgaaactgaggaatacattccatgtattccatacgaaattaaagtgttta cgtcagaaaaatctggagcagacacaagtgccgatgtttacattcagatttatggcaaagaaacgtgtacgcagcaaaag tcactctgtactggcaaaaatgaaagatcggggaaattcaaaaaaggagcttctgatgtttttgtgcttgagctggaaga tgttggagaaattactaaaatccggattggtcatgataatgcaggactttttgctggatggcatttggataaagtagaga tacgtaaactacaggagtccggaaaaggttccataatgtatagtttcccatgtaatcgctggttagcaagagacgaagaa gataaggctatagaaagagagctggttccggagagagtcacaaaggaagtcattaaagatggaaaaatacagcaaaaaga gatgaaagtcaaaaatcaactggaattgaaaaactacacagtaaatgtgcagacgatggatgtatcaggtgcagggacgg atgctaacgtctttataaatgtttacggagacaaagggaactcaggagaaagaaaactagccaagtcagagacgtacaga gataaatttgagagaggacataaagatgtattcaaaattgaagccagagacttgggtaatatatacaagctcaaaattca ccatgacaacaagaactttgggccgtcatggtatctggactatgtggaagtggtagacaactcggacaagaatcagtcat acatgttccattgtgagagatggttagccaaaaacaaggatgatggcaagatagaaaggacattgtatgtcaagggttat gagggagagatgggctccagtacaggtaccctgagatctaccaagtacgggtcagtagctagtctggactctatgaagag ttccgacccattctctaagagcccacgcgtgtcacgtaaacagctgatgcaagcagaggaggatgaggaaaatctggccc atggggatccgattacgtacaatgtgaaggtttggactggtgaaggagaagacaatggtacagatagtaatgtatgggtg aagattgtgggaccgaggggtatacatacaggcaaacagttcttggagtttgcacagaaagacaagtttgatcctggctc ggtcaaagtgttctcttttgatgctccagatgtgaatgaagtaaaaaagatagaggttggacatgatggcacggctcccg gcagtgactggttcctgaaggacatcagtatcaacatccccacaaaggggagacaatactcatttaactgtaaacagtgg cttggacgtcataaaggggatggcaaaactgtacgcacatttaggcttgatgatggactcagtcaaatcacaaagtacaa agccatggtaccatatgaggtgaccatacagaccggtgacaaacctgaggcaggcaccgacatggagatctatatgacgg tgttcggtgccaaaggctctacagctcctttactaatggagaaaggtacagagagattcgaaagggacagagcagatttc atcaggcttgagctagatgacatagctccattaaagaaaatacgactagaagtcagtggaaagggcagcagaccacagtg gtatctagatcatattgagttaagaaatatggacacaggtaccctgtcaaggtttgagtgtaatgattggtttggtaaaa agaaaggggatggtaaactcgtcagagatgtacctgctaaagaacgtggaaaacttgttataaacaacaacctataa |
|
Protein
| Protein ID | pfu_aug2.0_257.1_23763.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23763.t1 MVIVDDCDNNIVYEFPCQRWLARDMDDGQIWRDLLVNVGPTAAAPGIPYVITVQTGDEINAGTGARVFIMLYGGKNKEDC SGKIWLDNGKFERDRTDIFNIDIAALLSPLEKIEIGHDNSGIGPGWFLEQVIVYCPTTGIEQYFPCRKWFAKDSGDKQIQ RTLFEQTAVRKKREKRITWYVWVHTSDTSLAGTDAKVFMCVYGEKGKSEEIRLSNKVVKYQVEVYTGKKSGAGTDANVFL TIFGELGDTGRRFLRHSSTNINKFEKGQCDMFEIEAVTLEKISKIQIGHDGKGIGAGWYLDKVVIKNPSQPKHNVTFECF CWLAEDEGTGEIVKEFTVSGSQMLGKTTYNVHVKTGDERYSGTDANVYLQIYGSKGDTGELHLRQSENHSNKFERGKTDH FKLEATDIGKIKKIKIGHDGKNPGSGWFLDEVRIDIPSRGEQYVFACHRWLDKDEGDGLIELELEPSWKEDREKTIPYEV TVWTGDKRGAGTDARVFLQIYGKDGRTEDIELDNKSDNFERNKVDKFKIEGKDVGQIVKIRIGHDGTSMGDGWYLDKLLI QRKPRKPTKKQKGKKRPPSAVERRQSILADKMQSDSLDSDGSTSSSTTPRRRKSLKRRPSDLSAVKEESEEEEAYDEQDE TEDYWFFVDKWFAKSEGDKQIVRELIPTDKDGRPLKGALDDVEYIVRVYTGTVSGAGTDANVFITLYGKTDSGERQLKES NKFNKFENGQEDIFKVQAKELGPLTKVRIRHDNTGLLGAAWFLDRIEVEDTKKKKTYYFLCQRWLATGEDDGQICRELVA VDKALITKMANSKDAARKEVALETKAAMTTYHVKVVTGDVFGAGTDANVFLRLFGDQDNTEKIPLKSSLTYKDKFERNHT DEFILEVVNIGELSKVKLKGKRTILXKIERDLFPQELETEEYIPCIPYEIKVFTSEKSGADTSADVYIQIYGKETCTQQK SLCTGKNERSGKFKKGASDVFVLELEDVGEITKIRIGHDNAGLFAGWHLDKVEIRKLQESGKGSIMYSFPCNRWLARDEE DKAIERELVPERVTKEVIKDGKIQQKEMKVKNQLELKNYTVNVQTMDVSGAGTDANVFINVYGDKGNSGERKLAKSETYR DKFERGHKDVFKIEARDLGNIYKLKIHHDNKNFGPSWYLDYVEVVDNSDKNQSYMFHCERWLAKNKDDGKIERTLYVKGY EGEMGSSTGTLRSTKYGSVASLDSMKSSDPFSKSPRVSRKQLMQAEEDEENLAHGDPITYNVKVWTGEGEDNGTDSNVWV KIVGPRGIHTGKQFLEFAQKDKFDPGSVKVFSFDAPDVNEVKKIEVGHDGTAPGSDWFLKDISINIPTKGRQYSFNCKQW LGRHKGDGKTVRTFRLDDGLSQITKYKAMVPYEVTIQTGDKPEAGTDMEIYMTVFGAKGSTAPLLMEKGTERFERDRADF IRLELDDIAPLKKIRLEVSGKGSRPQWYLDHIELRNMDTGTLSRFECNDWFGKKKGDGKLVRDVPAKERGKLVINNNL |
|