Gene
| Gene Model ID | pfu_aug2.0_257.1_23765 |
|---|---|
| Locus | scaffold257.1 : 345677 ... 371050 : - |
| To GenomeBrowser | scaffold257.1:345677..371050 |
| Genes list of scaffold | scaffold257.1 |
| Synonym | pfu_aug1.0_10348.1_53529 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_257.1_23765.t1 | 1 | 1 | Tetraspannin | 12 | 223 | 9.79508e-43 | 145.9 | 0.0 | 1.10002e-42 | 145.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_257.1_23765.t1 | gi|676481366|ref|XP_009062352.1| | hypothetical protein LOTGIDRAFT_235152 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_257.1_23765.t1 | gi|348519182|ref|XP_003447110.1| | PREDICTED: tetraspanin-9-like [Oreochromis niloticus] | 5.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_257.1_23765.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23765.t1 atggctgctaaggatgtatcattacataagatactgaagtggacatttggaattctcaatgtcgtgtttttgctactagg agttgttgttttctgtgttggatgttacctgaaggtgtcacgctcagactacactgagatccttgacagtaaagagttcc agacaggcacggcactttgtatctctgcaggaatcatcgttgttgtggtatctctccttggatttttcggactagcccaa gaaaaccaattccttctagctttgtacttcatcgctgtggtgataatattttccatagagattgctgcgggtatcattgc ttttatctacagggataggataagagatgttttaagagaggacatgctcacaggacttaaagatgaaaaaaggagaacgg cgtggaatagagtccaggaaaaatatcagtgttgtggagtgaacaactacacagactgggagggtgtgtacagtgtggtg gatacaaaaacattacccgattcctgctgtggatatacaggttgtggaacagccggaggacaagtggcatggaacattgg ttgttacagagatgcagaggactggttaacagagaattatattcttttggccttagttgctgtggttgtaggggcattac agataattctaatgatatcaagcatagcaatgatagtaaagatacgacgatctaaactgcgttattccaaatactag |
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Protein
| Protein ID | pfu_aug2.0_257.1_23765.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23765.t1 MAAKDVSLHKILKWTFGILNVVFLLLGVVVFCVGCYLKVSRSDYTEILDSKEFQTGTALCISAGIIVVVVSLLGFFGLAQ ENQFLLALYFIAVVIIFSIEIAAGIIAFIYRDRIRDVLREDMLTGLKDEKRRTAWNRVQEKYQCCGVNNYTDWEGVYSVV DTKTLPDSCCGYTGCGTAGGQVAWNIGCYRDAEDWLTENYILLALVAVVVGALQIILMISSIAMIVKIRRSKLRYSKY |
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