Gene
| Gene Model ID | pfu_aug2.0_257.1_23766 |
|---|---|
| Locus | scaffold257.1 : 379297 ... 393559 : - |
| To GenomeBrowser | scaffold257.1:379297..393559 |
| Genes list of scaffold | scaffold257.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| carnitinyl- dehydratase-like | GO:0003824 GO:0008152 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_257.1_23766.t1 | 1 | 1 | ECH | 6 | 101 | 7.1e-14 | 51.5 | 5.6e-18 | 8.4e-14 | 51.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_257.1_23766.t1 | gi|301606203|ref|XP_002932717.1| | PREDICTED: probable enoyl-CoA hydratase, mitochondrial [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_257.1_23766.t1 | gi|676484427|ref|XP_009063343.1| | hypothetical protein LOTGIDRAFT_129882 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_257.1_23766.t1 | gi|288806585|ref|NP_001107511.2| | uncharacterized protein LOC100135367 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_257.1_23766.t1 | gi|748507479|ref|XP_011122539.1| | hypothetical protein AOL_s00079g362 [Arthrobotrys oligospora ATCC 24927] | 0.0 |
| pfu_aug2.0_257.1_23766.t1 | gi|637323143|ref|XP_008113183.1| | PREDICTED: enoyl-CoA hydratase domain-containing protein 2, mitochondrial-like isoform X1 [Anolis carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_257.1_23766.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23766.t1 gggtacccctcattgacggaggaacagttcgtctacctcacttgattgggttatcacgtgctttggacctcatcttgact gggcgggaaatcgacgcacacgaggcacaccagttcggtatcgctaacagggtagtgccaactggaaaaggtcttgacga agctataaagctagcagaaacattgctgaacttccctcagaagtgcatgaatcgtgacagaaaatcagcgtacaatgcca tgtttgacgccaagtctttcaaggacgcaatgcagtacgagtttaaacatggaatggaaataattcgagaagaatccata cccggagctaaaagattttcaaaaggtgcaggaagacacggaaatttcagagacattggtgacccaaaatcgaagctgta g |
|
Protein
| Protein ID | pfu_aug2.0_257.1_23766.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_257.1_23766.t1 VPLIDGGTVRLPHLIGLSRALDLILTGREIDAHEAHQFGIANRVVPTGKGLDEAIKLAETLLNFPQKCMNRDRKSAYNAM FDAKSFKDAMQYEFKHGMEIIREESIPGAKRFSKGAGRHGNFRDIGDPKSKL |
|