Gene
| Gene Model ID | pfu_aug2.0_2576.1_22110 |
|---|---|
| Locus | scaffold2576.1 : 1 ... 7371 : + |
| To GenomeBrowser | scaffold2576.1:1..7371 |
| Genes list of scaffold | scaffold2576.1 |
| Synonym | pfu_aug1.0_2281.1_44310 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2576.1_22110.t1 | 1 | 1 | C1q | 89 | 202 | 1.5e-22 | 79.9 | 1.4e-26 | 2.0e-22 | 79.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2576.1_22110.t1 | gi|657533218|ref|XP_008305247.1| | PREDICTED: complement C1q-like protein 4 [Stegastes partitus] | 8.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_2576.1_22110.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2576.1_22110.t1 atgcacgtttcgggtactaaaccctcgtcagtgatcctcagtctaaacaatgtaatgtggccaaaaaatgttggcgtgag ggggtccaaggagctggaggaaaccggagtgcccggagaaaatccccctgcagaggcctgggtgggggaccacctaccct cccacataagaccctttgccgaatctaagattcgatcccgggaccttagagcctttcaaaagcagattatttccttttta acctggttttcgaaactgcaatacaaacatgaaaacagcgaagcagtcaagtttgatcaggtgatcgagaacatcggagg aggctacgatccttcaactggaaaattcacggctcctgtgtccggaatctactccatatcagtgtccaccatgagtcaac cgataaatgcgatgcacctcggaataatgaggaacgaccaactcttgtctgtcttatactcacacaacggtacataccca caggcaacaaacaccttgaatttgtcaatgaaggatggagacacagtttgggtacagattattaccggagaggttcttca tgtaaatcattataggccatataacgtattctccggaaaccttatcgccatgatgtag |
|
Protein
| Protein ID | pfu_aug2.0_2576.1_22110.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2576.1_22110.t1 MHVSGTKPSSVILSLNNVMWPKNVGVRGSKELEETGVPGENPPAEAWVGDHLPSHIRPFAESKIRSRDLRAFQKQIISFL TWFSKLQYKHENSEAVKFDQVIENIGGGYDPSTGKFTAPVSGIYSISVSTMSQPINAMHLGIMRNDQLLSVLYSHNGTYP QATNTLNLSMKDGDTVWVQIITGEVLHVNHYRPYNVFSGNLIAMM |
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