Gene
| Gene Model ID | pfu_aug2.0_2576.1_22114 |
|---|---|
| Locus | scaffold2576.1 : 85816 ... 89925 : + |
| To GenomeBrowser | scaffold2576.1:85816..89925 |
| Genes list of scaffold | scaffold2576.1 |
| Synonym | pfu_aug1.0_1391.1_07933 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| signal peptidase 18 kda subunit | GO:0005524 GO:0006465 GO:0006508 GO:0008236 GO:0008641 GO:0016021 GO:0016881 GO:0045116 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2576.1_22114.t1 | 1 | 1 | Peptidase_S24 | 1 | 48 | 2.0e-07 | 30.5 | 4.2e-11 | 3.1e-07 | 29.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2576.1_22114.t1 | gi|91078170|ref|XP_966880.1| | PREDICTED: signal peptidase complex catalytic subunit SEC11A [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2576.1_22114.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2576.1_22114.t1 atggagccagcatttcatagaggagatttattattcctgactaactatgtagaggaaccaatcagagtcggagaaattgt tgtcttcaaagtggaagggagggatataccaatagtccaccgtgtattaaaggttcatgaaaaagaggatggcactgtaa agttcctgacaaagggagataacaattctgtagatgatagaggattatatgcccctggacagctatggctggagaagaaa gatgttgttggcagagctagaggatttgtaccttatgttggaattgtaaccatattgatgaatgattatcccaaatttaa gtatgcaatattagcgtgtcttggattatttgtgttaatacatcgagagtag |
|
Protein
| Protein ID | pfu_aug2.0_2576.1_22114.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2576.1_22114.t1 MEPAFHRGDLLFLTNYVEEPIRVGEIVVFKVEGRDIPIVHRVLKVHEKEDGTVKFLTKGDNNSVDDRGLYAPGQLWLEKK DVVGRARGFVPYVGIVTILMNDYPKFKYAILACLGLFVLIHRE |
|