Gene
| Gene Model ID | pfu_aug2.0_258.1_27122 |
|---|---|
| Locus | scaffold258.1 : 81446 ... 98483 : + |
| To GenomeBrowser | scaffold258.1:81446..98483 |
| Genes list of scaffold | scaffold258.1 |
| Synonym | pfu_aug1.0_2651.1_30207 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_258.1_27122.t1 | 11 | 1 | PC_rep | 136 | 152 | 1.5e-30 | 103.7 | 1.2 | 5900.0 | -2.2 |
| pfu_aug2.0_258.1_27122.t1 | 11 | 2 | PC_rep | 175 | 185 | 1.5e-30 | 103.7 | 1.3 | 6500.0 | -2.3 |
| pfu_aug2.0_258.1_27122.t1 | 11 | 3 | PC_rep | 361 | 393 | 1.5e-30 | 103.7 | 1.5e-06 | 0.0072 | 16.5 |
| pfu_aug2.0_258.1_27122.t1 | 11 | 4 | PC_rep | 395 | 430 | 1.5e-30 | 103.7 | 3.8e-09 | 1.9e-05 | 24.6 |
| pfu_aug2.0_258.1_27122.t1 | 11 | 5 | PC_rep | 432 | 465 | 1.5e-30 | 103.7 | 1.3e-09 | 6.3e-06 | 26.1 |
| pfu_aug2.0_258.1_27122.t1 | 11 | 6 | PC_rep | 470 | 493 | 1.5e-30 | 103.7 | 3.0e-06 | 0.015 | 15.4 |
| pfu_aug2.0_258.1_27122.t1 | 11 | 7 | PC_rep | 510 | 517 | 1.5e-30 | 103.7 | 1.3 | 6600.0 | -2.3 |
| pfu_aug2.0_258.1_27122.t1 | 11 | 8 | PC_rep | 551 | 565 | 1.5e-30 | 103.7 | 0.52 | 2600.0 | -1.0 |
| pfu_aug2.0_258.1_27122.t1 | 11 | 9 | PC_rep | 649 | 679 | 1.5e-30 | 103.7 | 0.00053 | 2.6 | 8.4 |
| pfu_aug2.0_258.1_27122.t1 | 11 | 10 | PC_rep | 682 | 707 | 1.5e-30 | 103.7 | 3.9e-08 | 0.0002 | 21.4 |
| pfu_aug2.0_258.1_27122.t1 | 11 | 11 | PC_rep | 721 | 732 | 1.5e-30 | 103.7 | 0.077 | 380.0 | 1.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_258.1_27122.t1 | gi|676448988|ref|XP_009051909.1| | hypothetical protein LOTGIDRAFT_187615 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_258.1_27122.t1 | gi|657587261|ref|XP_008297914.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 [Stegastes partitus] | 0.0 |
| pfu_aug2.0_258.1_27122.t1 | gi|530580331|ref|XP_005284064.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_258.1_27122.t1 | gi|632968484|ref|XP_007900553.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_258.1_27122.t1 | gi|742081013|ref|XP_010879008.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_258.1_27122.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_258.1_27122.t1 atggcggacaagaagacagaggataacaaaaaagaggagaaagaccccaagaagaaagaagagaaagaacaagaacttga gccagaccagaaattgtaccgtcctgcattggagagtttacgatcccagatacgtgcctctacgacctccatgacttctg tacccaagccactcaaattcctccgccctcactatgactcactgaaagaagtatacgaaaaaataaaagacatggaaaca aagagattttgcgcagatatcatatcagttatgggaatgacaaagtcaggggaagaaagagacagccttaaatacaggct cctgggatcaaaagaggaaataggttcctggggtcacgaatatgtcagacacttagcaggacaagttgctcaggagtggc aggacttaggggagcaggataacgagatgagagagaaacttctaacgatgaccaaggagattgtaccgtaccacatggac cataatgccgaggccgaggcttgtgatctactcatggaaatagaaaaactcgaccttctccaaaactacgtagacgaaaa tgtctatccaagggtgtgtttgtatctcacaagctgtgtaccatatgtaccagatcctgagaacaccacattactaagga cagctgtagacttatatagaaagtttaatcagtacccacaagccatacggtttgccatgcagcttaatgatatggctctt gtggaagagatcttcacatcctgcaaggattcattaatgcagaaacagttagcctatatgttaggcagacagcagatttt cttggaattaaacgatgatacagaggacttcgatgaactcacagaaattatgtctaacgcacatctcaataataatttcc ttgctctggctcgtgagataagatcagtatgcctgtttctttcagggacgacaattggaccaagtaatgtcgactcagca cgtcagaatttagcagcctcattcgtaaacggttttgttaatgcaggatttggtcaggataaactactaatggaggatgg aaataagtggctgtataaaaataaagaacatggtatgttaagtgccacagcatctttgggtttggtattattatgggatg tagacggtggactgacacagatagataaatacctgtactcatcagacgattatataaaggctggtgcattgttagcatgc ggtattgtcaactctggagtaaggaatgaatgtgaccccgccttagctttactctcagactatgtcacacacaacgtaga tatcatgaaaattggtgctatagttggattaggattagcatatgctggctcaaatagagaagatgttttgacgctgattt tacctgtattaggtgatagtaaggcaaagatggaggtgattggtatggcagcgttagcatgtggtatgatctgtgtggga agctgtaatggggacgtcacatccacaatactacagaccatgatggagagacccgaggctgatcttaaagatacaaacgc tagattcctagctatgggattagcactcgcttacctaggtaaacaagatgcagttgatgctactttgatggcattagagg ttataggagagcccctcaaatctatggccaggatgatggtggatgtatgcgcttatgcaggtactggaaatgttttaaaa attcagcatcttctacatgtatgttcagaacatgatgaatctaaagatcaggataataatgagaaaggagatgataaaaa gaaggataagaaagataaagagaaggaaaaagaagtatcagctgacttgtcatgtcaacaaggtatagctgtattaggta tagcactaatagccatgggagaggatgtgggagcagaaatgtcatttcgagcctttggacatctgttaagatatggtgag gtggccatcaagagagctgtaccattagccctcggtctgatctctgtctccaaccccaagctacaaatacttgatacgtt aagtaaattctcacatgacagtgaccctgaagtatcccataatgcaatattagccatgggaattgtaggtgccggtacaa ataatgcccgtctggctgcaatgttacgtcagttagctgtgtatcatgccaaggaccctaacaatctatttatggtgagg ttagcccagggcctgacccatttaggtaaaggtaccctgacactgtgtccttatcacagtgataaagccctcatgtcacc tgttgctgtggctggactcctggctgtccttgtgtcctgtctagatgtcaaaaatttaattataggtaaatctcactaca cattataccatttggttgccgccatgcagcctcgtatgttaacaacatttgatgaagagcttcgcccactacctgtacct gtcagggttggccaggcagtagatgttgtgggacaggcaggtaagcctaagacaattacaggattccagacacataccac accagtactcttagcttacggagaaagggcggaactagctacagaagaatatttatcattaagtcccatcatggagggct ttgtcattctcaggaagaacccggactatgaagaatga |
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Protein
| Protein ID | pfu_aug2.0_258.1_27122.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_258.1_27122.t1 MADKKTEDNKKEEKDPKKKEEKEQELEPDQKLYRPALESLRSQIRASTTSMTSVPKPLKFLRPHYDSLKEVYEKIKDMET KRFCADIISVMGMTKSGEERDSLKYRLLGSKEEIGSWGHEYVRHLAGQVAQEWQDLGEQDNEMREKLLTMTKEIVPYHMD HNAEAEACDLLMEIEKLDLLQNYVDENVYPRVCLYLTSCVPYVPDPENTTLLRTAVDLYRKFNQYPQAIRFAMQLNDMAL VEEIFTSCKDSLMQKQLAYMLGRQQIFLELNDDTEDFDELTEIMSNAHLNNNFLALAREIRSVCLFLSGTTIGPSNVDSA RQNLAASFVNGFVNAGFGQDKLLMEDGNKWLYKNKEHGMLSATASLGLVLLWDVDGGLTQIDKYLYSSDDYIKAGALLAC GIVNSGVRNECDPALALLSDYVTHNVDIMKIGAIVGLGLAYAGSNREDVLTLILPVLGDSKAKMEVIGMAALACGMICVG SCNGDVTSTILQTMMERPEADLKDTNARFLAMGLALAYLGKQDAVDATLMALEVIGEPLKSMARMMVDVCAYAGTGNVLK IQHLLHVCSEHDESKDQDNNEKGDDKKKDKKDKEKEKEVSADLSCQQGIAVLGIALIAMGEDVGAEMSFRAFGHLLRYGE VAIKRAVPLALGLISVSNPKLQILDTLSKFSHDSDPEVSHNAILAMGIVGAGTNNARLAAMLRQLAVYHAKDPNNLFMVR LAQGLTHLGKGTLTLCPYHSDKALMSPVAVAGLLAVLVSCLDVKNLIIGKSHYTLYHLVAAMQPRMLTTFDEELRPLPVP VRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAYGERAELATEEYLSLSPIMEGFVILRKNPDYEE |
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