Gene
| Gene Model ID | pfu_aug2.0_258.1_27127 |
|---|---|
| Locus | scaffold258.1 : 150936 ... 153612 : + |
| To GenomeBrowser | scaffold258.1:150936..153612 |
| Genes list of scaffold | scaffold258.1 |
| Synonym | pfu_aug1.0_812.1_22321 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_258.1_27127.t1 | 3 | 1 | zf-CDGSH | 35 | 68 | 1.1e-16 | 60.3 | 1.4e-15 | 2.1e-11 | 43.4 |
| pfu_aug2.0_258.1_27127.t1 | 3 | 2 | zf-CDGSH | 84 | 104 | 1.1e-16 | 60.3 | 5.7e-10 | 8.5e-06 | 25.5 |
| pfu_aug2.0_258.1_27127.t1 | 3 | 3 | zf-CDGSH | 124 | 133 | 1.1e-16 | 60.3 | 0.28 | 4100.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_258.1_27127.t1 | gi|675874456|ref|XP_009022788.1| | hypothetical protein HELRODRAFT_188924 [Helobdella robusta] | 1.99965e-42 |
| pfu_aug2.0_258.1_27127.t1 | gi|585682926|ref|XP_006812323.1| | PREDICTED: uncharacterized protein LOC102809578 [Saccoglossus kowalevskii] | 1.99965e-42 |
| pfu_aug2.0_258.1_27127.t1 | gi|470362139|ref|XP_004365271.1| | hypothetical protein CAOG_00400 [Capsaspora owczarzaki ATCC 30864] | 8.0e-40 |
| pfu_aug2.0_258.1_27127.t1 | gi|390346069|ref|XP_003726471.1| | 1.0e-39 | |
| pfu_aug2.0_258.1_27127.t1 | gi|156393478|ref|XP_001636355.1| | predicted protein [Nematostella vectensis] | 1.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_258.1_27127.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_258.1_27127.t1 atgaaagtgaaagtaaaagcggaagcacgtgtctgcttgacaataatgtcaacatcacagtcaaatgaatgtcagcagca acattatcccgctgtttctatgtatggaccttgtacggttgccaatttagagcctggccagaccaagttatggtgtgcct gtggtccgagtaaaaaccagccttggtgtgatggttctcacaagggtaccggtatcagcccattaaaatggacagtaaag aaaaaacagagactgcatcaaatatgtgcgtgtaaatataccaaagatccgccttactgtgacgctacccacacaaactt gccgtgtcaggtcttagatagacaggagaaatgtccgctaaaatcagacagtcataatactcaaactaagctttgtacag gatgtggatggataccagacttctaa |
|
Protein
| Protein ID | pfu_aug2.0_258.1_27127.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_258.1_27127.t1 MKVKVKAEARVCLTIMSTSQSNECQQQHYPAVSMYGPCTVANLEPGQTKLWCACGPSKNQPWCDGSHKGTGISPLKWTVK KKQRLHQICACKYTKDPPYCDATHTNLPCQVLDRQEKCPLKSDSHNTQTKLCTGCGWIPDF |
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