Gene
| Gene Model ID | pfu_aug2.0_258.1_27130 |
|---|---|
| Locus | scaffold258.1 : 295215 ... 317492 : + |
| To GenomeBrowser | scaffold258.1:295215..317492 |
| Genes list of scaffold | scaffold258.1 |
| Synonym | pfu_aug1.0_156.1_22031 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_258.1_27130.t1 | 1 | 1 | Histone | 109 | 174 | 8.9e-09 | 35.3 | 8.1e-12 | 2.0e-08 | 34.2 |
| pfu_aug2.0_258.1_27130.t1 | 2 | 1 | RhoGEF | 209 | 383 | 8.6e-16 | 58.3 | 3.5e-19 | 8.6e-16 | 58.3 |
| pfu_aug2.0_258.1_27130.t1 | 1 | 1 | PH | 445 | 548 | 1.8e-09 | 37.7 | 1.6e-12 | 3.9e-09 | 36.6 |
| pfu_aug2.0_258.1_27130.t1 | 2 | 2 | RhoGEF | 526 | 564 | 8.6e-16 | 58.3 | 2.6 | 6400.0 | -3.2 |
| pfu_aug2.0_258.1_27130.t1 | 1 | 1 | RasGEF_N | 605 | 722 | 3.7e-32 | 110.5 | 5.4e-35 | 1.3e-31 | 108.7 |
| pfu_aug2.0_258.1_27130.t1 | 2 | 1 | RasGEF | 779 | 832 | 1.82169e-44 | 151.7 | 1.8e-12 | 4.5e-09 | 36.2 |
| pfu_aug2.0_258.1_27130.t1 | 2 | 2 | RasGEF | 941 | 1073 | 1.82169e-44 | 151.7 | 4.6e-36 | 1.1e-32 | 113.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_258.1_27130.t1 | gi|676485567|ref|XP_009063697.1| | hypothetical protein LOTGIDRAFT_210797 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_258.1_27130.t1 | gi|524880084|ref|XP_005096710.1| | PREDICTED: son of sevenless homolog 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_258.1_27130.t1 | gi|260831098|ref|XP_002610496.1| | hypothetical protein BRAFLDRAFT_275769 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_258.1_27130.t1 | gi|242014971|ref|XP_002428152.1| | ras GTP exchange factor, son of sevenless, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_258.1_27130.t1 | gi|242002516|ref|XP_002435901.1| | ras GTP exchange factor, son of sevenless, putative [Ixodes scapularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_258.1_27130.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_258.1_27130.t1 atgtttccagttcctggtgtcgtggaagcccaaccatatgatttcaattcaaatgacaacgcacagaagtggaggggatt gtttataacggcactcgaaaatgtacagcaccaggtgaatccgtccctggtggccaaggaggatgccctacagtatatag agggtctgatcctgaacctcctgggaactctttgtgtttgtcagccccatactgtgcaagatgtccaggacagggtgcag aaaaccttccctgaccctattgataagtgggctatgggagatgccaatgccgctctggagaaaggaaagaaaaactccaa tatagtgctaccggtagacaagatacaccacttgctgatcaaggaagtcctaggatacaagatagattttcaagtctcac tgtacattgtagctgtgcttgagtatattgctgcagacattttgaagctgactggaaagtatgtcagaaaggtaaagcac agtgaaataacatctcaggacatcaaagtggcaatatgtgcagaccaggtgctgatggacatgttttcccaggaggagga tgtatccctccctctgatggaggaacccctagggctgcgtacagaaaagcagacatacgaggatattgttaaggacttca tttttgaggagacacagtatatgagagatcttaatcagatcattaaggtgttccgtgctccttttgtgaagcacttccct cgtagcaaggaccttgaggtgatctttagtaacattctggacatttatgagttcacagccaatctgcagagctcagtgga ggaacaggtagagctagcagctgagaatgagactccgttagttgggatatgcttccaggatatggcagaggaagaagaat tcaatgtttatgaaaagtatgttgaggatatgttgcaaccaaggggcaaccagagattgaatacattgctaggacgtaat gaccttagccaaacattagaggctgaaggacatgggtttaaagatgcaatgaaatatgtcttgccaaagctgttattagg gccaatttatcactgtttacattattttgaagtcattaaagctttaagcaatgccagtccctgtgaagaagatcgtgaat gtttagaacaggccagtggattgttagcctccttaaaagctgtgttagagagaacgtttagtggaaactatcccagagct aaaccttgggaaacatcgttaagattacaaggaagaacagggcgacaagcggttgtacagaaaatgtcagagttacagag aagtatagatggctgggagggtaaagctatctggcaaagctgctcagagtttatcacagagggtattcttatgaaatata caaaaagcaagtcatctactgaaaggcatgttttcctgttcgatggattgataattctttgcaagcaaaatctacggagg acttcagtcacaaatccatcgggagaattcaaactaaaggagaaattcagcattcggaaagttgaatttcgggataggga ggatacagaagaaatgaagaactggtttgagatagcaccaaaggaccatcctaacaacagtataacattattggccaaat cacaggaggagaagagtaactggatggctgccttcatcactctacagacaaggagcatgctggagcgaaggttggacagc atactaaagaaggaagagcaagaaaaacctctgaaactacccccagaagatacatatagatttgctaaagaagattctgg agagaacatagtatttgaagaaaggggatcctccccctctgagagtcccctaatcaaaggagggacgctgctcaagctga tagaacgattaacataccacatgtacgcagatccccagtttgtgagaacattccttaccacctatagatcattctgtaca cctgaacagctgctagatctactcatagaaaggttcaatattcctgaccctccggccaacctccagaatgatttgaccag ggatgctgaccataatcagcagattagggatgatctcaaaaggttccgcaaagaatatatcaaaccggttcaatttagag tagtgaatgtactacggcattgggtagaccatcactactatgattttgagaggaaccttgaccttttacacaagcttagg gatttcctaggcacggttaaagggaaagccatgaaaaagatggcagagtcaatcattaaagtgatccgcaggcggtttga aagtttaagtacagaaagagaaatcacacaccagagtcagcctcctaaaatagaatggcacatagccaggaaaaaggagg aatttgacctcatgactcttcaccctatagagatagcccggcaggtcacactactggagtttgatttgtatcgagccgta cagccctctgaattggtgggatgtgcctgggtgaaggaaacaaagaaacagaactcacccaatcttctcaaacttataga ctttactaataatttcgatgtgtttgatcagttcgatgtgtttgatcagttcgatgtgtttgatctgttcgatgtgtttg atcagttcgatgtgtttgatcagttcgatgtgtttgatcagttcgatgtatttgatcagttcgatgtgtttgatcagttc gatgtatttgatcagtttgatgtgtttgatcagttcgatgtatttaatcagttcgatgtgtttgatcagttcgatgtatt tgatcagttcgatgtttttgatcagttcgatgtgtttgatcagttcgatgtatttgatcagtttgatgtgtgtcacttcc agttggacggtacgagatttgataaccattttactttctggttagagaaatgtataataacaacagaaaatctagacgag cgagtggccattatgaacagaattttggaaataatgatagtcttccaagaattgaacaattttaacggtgttctagcagt agttagtgcaatacattcagcttctgttcataggctggaacacacgtacgatgaagtaaagtataagagaaactttgagg aggcaaaggaattgaactctgaaagatttaagaagtatcaggaaaaattacgctccattaatccaccatgtgtcccattc tttggaatgtaccttacaaacattctcttcattgaggagggtaatcctgactacttaccgagaacaacggacatgattaa cttcagtaaacgacggaaagtagcggaaataacgggggagatccagcaatatcagaatcagccatactgtctcagtgtag aacctgatataagggtcaattctggtatagattctgtatcttatgcttcatcaacattatcactgaatcaagggccaccc acccaccctccactgcctagacctacgccagtcaatctacagcccccaccattacctccacgcaaaaaatatagagactc cattaatgacattggattgtcacgctctttgacctccccgattgtgtcagagccccctattccacctagaggagcgcctc ctgtacccccgagaagagactcgtttcatagtggacaacttcaatcacgtcattcttctggtcatatttcttgtgcgaca ctgccacgttgcgcggctttaagtggtggtcgcaacccttcaaatcgtgccacatttcctgttgaattccataacggaaa tggagacgataaaaatagtgatagtgaaatacccaagcttccacctaaaacttatcggactcatcaccatacaaggcaaa agagcagttag |
|
Protein
| Protein ID | pfu_aug2.0_258.1_27130.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_258.1_27130.t1 MFPVPGVVEAQPYDFNSNDNAQKWRGLFITALENVQHQVNPSLVAKEDALQYIEGLILNLLGTLCVCQPHTVQDVQDRVQ KTFPDPIDKWAMGDANAALEKGKKNSNIVLPVDKIHHLLIKEVLGYKIDFQVSLYIVAVLEYIAADILKLTGKYVRKVKH SEITSQDIKVAICADQVLMDMFSQEEDVSLPLMEEPLGLRTEKQTYEDIVKDFIFEETQYMRDLNQIIKVFRAPFVKHFP RSKDLEVIFSNILDIYEFTANLQSSVEEQVELAAENETPLVGICFQDMAEEEEFNVYEKYVEDMLQPRGNQRLNTLLGRN DLSQTLEAEGHGFKDAMKYVLPKLLLGPIYHCLHYFEVIKALSNASPCEEDRECLEQASGLLASLKAVLERTFSGNYPRA KPWETSLRLQGRTGRQAVVQKMSELQRSIDGWEGKAIWQSCSEFITEGILMKYTKSKSSTERHVFLFDGLIILCKQNLRR TSVTNPSGEFKLKEKFSIRKVEFRDREDTEEMKNWFEIAPKDHPNNSITLLAKSQEEKSNWMAAFITLQTRSMLERRLDS ILKKEEQEKPLKLPPEDTYRFAKEDSGENIVFEERGSSPSESPLIKGGTLLKLIERLTYHMYADPQFVRTFLTTYRSFCT PEQLLDLLIERFNIPDPPANLQNDLTRDADHNQQIRDDLKRFRKEYIKPVQFRVVNVLRHWVDHHYYDFERNLDLLHKLR DFLGTVKGKAMKKMAESIIKVIRRRFESLSTEREITHQSQPPKIEWHIARKKEEFDLMTLHPIEIARQVTLLEFDLYRAV QPSELVGCAWVKETKKQNSPNLLKLIDFTNNFDVFDQFDVFDQFDVFDLFDVFDQFDVFDQFDVFDQFDVFDQFDVFDQF DVFDQFDVFDQFDVFNQFDVFDQFDVFDQFDVFDQFDVFDQFDVFDQFDVCHFQLDGTRFDNHFTFWLEKCIITTENLDE RVAIMNRILEIMIVFQELNNFNGVLAVVSAIHSASVHRLEHTYDEVKYKRNFEEAKELNSERFKKYQEKLRSINPPCVPF FGMYLTNILFIEEGNPDYLPRTTDMINFSKRRKVAEITGEIQQYQNQPYCLSVEPDIRVNSGIDSVSYASSTLSLNQGPP THPPLPRPTPVNLQPPPLPPRKKYRDSINDIGLSRSLTSPIVSEPPIPPRGAPPVPPRRDSFHSGQLQSRHSSGHISCAT LPRCAALSGGRNPSNRATFPVEFHNGNGDDKNSDSEIPKLPPKTYRTHHHTRQKSS |
|