Gene
| Gene Model ID | pfu_aug2.0_2581.1_05587 |
|---|---|
| Locus | scaffold2581.1 : 1454 ... 14475 : - |
| To GenomeBrowser | scaffold2581.1:1454..14475 |
| Genes list of scaffold | scaffold2581.1 |
| Synonym | pfu_aug1.0_7893.1_38660 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2581.1_05587.t1 | 3 | 1 | HLH | 22 | 29 | 3.1e-17 | 62.0 | 0.43 | 6400.0 | -3.1 |
| pfu_aug2.0_2581.1_05587.t1 | 3 | 2 | HLH | 65 | 71 | 3.1e-17 | 62.0 | 0.11 | 1700.0 | -1.2 |
| pfu_aug2.0_2581.1_05587.t1 | 3 | 3 | HLH | 77 | 128 | 3.1e-17 | 62.0 | 2.1e-21 | 3.1e-17 | 62.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2581.1_05587.t1 | gi|676492508|ref|XP_009065940.1| | hypothetical protein LOTGIDRAFT_133561 [Lottia gigantea] | 2.0e-31 |
| pfu_aug2.0_2581.1_05587.t1 | gi|662183039|ref|XP_008467919.1| | PREDICTED: helix-loop-helix protein 1-like [Diaphorina citri] | 2.0e-30 |
| pfu_aug2.0_2581.1_05587.t1 | gi|700392467|ref|XP_009936659.1| | PREDICTED: helix-loop-helix protein 1 [Opisthocomus hoazin] | 3.0e-29 |
| pfu_aug2.0_2581.1_05587.t1 | gi|584037039|ref|XP_006752908.1| | PREDICTED: helix-loop-helix protein 1 [Myotis davidii] | 1.0e-28 |
| pfu_aug2.0_2581.1_05587.t1 | gi|759079143|ref|XP_011349383.1| | PREDICTED: helix-loop-helix protein 1 [Cerapachys biroi] | 1.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_2581.1_05587.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2581.1_05587.t1 atgaaaggagcaattgagccacatgaaaacctgtacttctacccgattttctctggaatcatgcaccctataagggaaag cgtccgagataggatggtgaactacgattctgacgatttcccatattccaacaatcaaaatgaaggaccaatacgaaaag gcgggaatcaagacaattctataagtagagaggaaagaaggcgacggagacgtgcaactccaaaataccgcactgcgcat gctacaagggaacggttccgggtggaggcattcaaccaagcttttggagaattgaggaaactattaccgattcttcctcc agataagaaactttccaaaatcgaaattctacggctggctatttgttatatcgcacaccttagaaatgttctggaacttt attga |
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Protein
| Protein ID | pfu_aug2.0_2581.1_05587.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2581.1_05587.t1 MKGAIEPHENLYFYPIFSGIMHPIRESVRDRMVNYDSDDFPYSNNQNEGPIRKGGNQDNSISREERRRRRRATPKYRTAH ATRERFRVEAFNQAFGELRKLLPILPPDKKLSKIEILRLAICYIAHLRNVLELY |
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