Gene
Gene Model ID | pfu_aug2.0_2581.1_05589 |
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Locus | scaffold2581.1 : 25377 ... 40725 : - |
To GenomeBrowser | scaffold2581.1:25377..40725 |
Genes list of scaffold | scaffold2581.1 |
Synonym | pfu_aug1.0_17458.1_03829 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_2581.1_05589.t2 | 6 | 1 | Kelch_2 | 14 | 53 | 4.3e-23 | 80.1 | 0.36 | 750.0 | 0.1 |
pfu_aug2.0_2581.1_05589.t2 | 6 | 1 | Kelch_5 | 63 | 81 | 4.7e-18 | 64.7 | 0.0026 | 5.4 | 7.0 |
pfu_aug2.0_2581.1_05589.t2 | 4 | 1 | Kelch_1 | 64 | 108 | 2.2e-37 | 126.3 | 4.6e-13 | 9.8e-10 | 37.8 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 1 | Kelch_6 | 64 | 111 | 1.8e-30 | 103.8 | 2.4e-11 | 5.1e-08 | 32.7 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 1 | Kelch_4 | 67 | 109 | 5.4e-27 | 93.3 | 6.5e-08 | 0.00014 | 21.5 |
pfu_aug2.0_2581.1_05589.t2 | 6 | 2 | Kelch_2 | 67 | 108 | 4.3e-23 | 80.1 | 9.1e-06 | 0.019 | 14.6 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 1 | Kelch_3 | 72 | 117 | 3.8e-23 | 81.0 | 2.9e-10 | 6.1e-07 | 29.4 |
pfu_aug2.0_2581.1_05589.t2 | 6 | 2 | Kelch_5 | 107 | 146 | 4.7e-18 | 64.7 | 1.7e-06 | 0.0036 | 17.2 |
pfu_aug2.0_2581.1_05589.t2 | 4 | 2 | Kelch_1 | 110 | 153 | 2.2e-37 | 126.3 | 3.0e-13 | 6.4e-10 | 38.4 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 2 | Kelch_6 | 111 | 150 | 1.8e-30 | 103.8 | 2.3e-09 | 4.9e-06 | 26.4 |
pfu_aug2.0_2581.1_05589.t2 | 6 | 3 | Kelch_2 | 111 | 151 | 4.3e-23 | 80.1 | 5.6e-07 | 0.0012 | 18.5 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 2 | Kelch_4 | 115 | 155 | 5.4e-27 | 93.3 | 2.3e-11 | 4.9e-08 | 32.6 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 2 | Kelch_3 | 121 | 166 | 3.8e-23 | 81.0 | 2.3e-11 | 4.8e-08 | 32.9 |
pfu_aug2.0_2581.1_05589.t2 | 6 | 3 | Kelch_5 | 157 | 181 | 4.7e-18 | 64.7 | 1.2e-06 | 0.0026 | 17.6 |
pfu_aug2.0_2581.1_05589.t2 | 4 | 3 | Kelch_1 | 158 | 188 | 2.2e-37 | 126.3 | 8.6e-08 | 0.00018 | 20.9 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 3 | Kelch_6 | 158 | 188 | 1.8e-30 | 103.8 | 1.4e-06 | 0.0029 | 17.7 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 3 | Kelch_4 | 158 | 197 | 5.4e-27 | 93.3 | 2.0e-08 | 4.3e-05 | 23.1 |
pfu_aug2.0_2581.1_05589.t2 | 6 | 4 | Kelch_2 | 158 | 188 | 4.3e-23 | 80.1 | 4.9e-05 | 0.1 | 12.3 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 3 | Kelch_3 | 169 | 196 | 3.8e-23 | 81.0 | 0.049 | 100.0 | 3.2 |
pfu_aug2.0_2581.1_05589.t2 | 6 | 4 | Kelch_5 | 205 | 227 | 4.7e-18 | 64.7 | 0.064 | 140.0 | 2.6 |
pfu_aug2.0_2581.1_05589.t2 | 6 | 5 | Kelch_2 | 210 | 227 | 4.3e-23 | 80.1 | 0.0025 | 5.3 | 6.9 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 4 | Kelch_6 | 213 | 229 | 1.8e-30 | 103.8 | 0.12 | 250.0 | 2.1 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 4 | Kelch_4 | 215 | 226 | 5.4e-27 | 93.3 | 2.7 | 5700.0 | -2.8 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 4 | Kelch_3 | 279 | 296 | 3.8e-23 | 81.0 | 0.2 | 430.0 | 1.2 |
pfu_aug2.0_2581.1_05589.t2 | 6 | 5 | Kelch_5 | 279 | 285 | 4.7e-18 | 64.7 | 3.4 | 7300.0 | -3.0 |
pfu_aug2.0_2581.1_05589.t2 | 6 | 6 | Kelch_5 | 289 | 310 | 4.7e-18 | 64.7 | 2.1e-06 | 0.0045 | 16.9 |
pfu_aug2.0_2581.1_05589.t2 | 4 | 4 | Kelch_1 | 290 | 331 | 2.2e-37 | 126.3 | 4.7e-09 | 9.9e-06 | 25.0 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 5 | Kelch_6 | 290 | 331 | 1.8e-30 | 103.8 | 5.6e-07 | 0.0012 | 18.9 |
pfu_aug2.0_2581.1_05589.t2 | 6 | 6 | Kelch_2 | 290 | 332 | 4.3e-23 | 80.1 | 2.3e-07 | 0.00048 | 19.7 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 5 | Kelch_4 | 291 | 311 | 5.4e-27 | 93.3 | 1.7e-05 | 0.036 | 13.8 |
pfu_aug2.0_2581.1_05589.t2 | 5 | 5 | Kelch_3 | 299 | 331 | 3.8e-23 | 81.0 | 0.0022 | 4.6 | 7.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_2581.1_05589.t2 | gi|260798879|ref|XP_002594427.1| | hypothetical protein BRAFLDRAFT_119957 [Branchiostoma floridae] | 2.0e-17 |
Transcript
Transcript ID | pfu_aug2.0_2581.1_05589.t1 |
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Definition | - |
>pfu_aug2.0_2581.1_05589.t1 atgagcgttaatggcttgccgtccgtacataaatccaccaccaccacttccttcttgcagtcccggctgtacactattag tcggtccggatccggtgaagccttttacgtcatcataagtccgcatcatgacgaaatcttgtcgtaccaaatcagaatcg aacattggaaggctacgaagcacgtggctgattttggtgtagcagtttatagaaatgttctctatgttatcggaggattc aatatcaagacggcaaaacatttgaaaacagtggtcagatataatcccgatgatggactttggaaagaagtgcagtccat gccaacagccagagccaaatttgcaacagccgtacaggacggaaaaatcttagtattaggtggtgaaggtcaagacggca gagttacctcctcctgttattcatacgatccggagacggatgaatggacgatttcctcctcattagtgtcgcctagagcc aatcacgcatgcgtagtatgcaacaaagaaatttattgttccggtgggagatacgggaataaaagtcataaaaatatctg ggtgaaggagggaggggactgggaggatcttggaaggccgtacccccagaagctgcccgtcccactcgatagactagcga tgaccacctggaggagacaaatattctttgtcggcggagtatattgtaaaaaggatagaaaggacgaaaaacgtaaattc ctgactgaagcccggatgttttcatatacaaccagcgtgtcggccatgagctcatcacgtgacgaagcagacgatgggga agatgaatacattcaacaagaatttctgtcaccatggagattagatttaccaaatatgaattttggaagacacagtcatg gggcaatagctttaggtacatga |
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Transcript ID | pfu_aug2.0_2581.1_05589.t2 |
Definition | - |
>pfu_aug2.0_2581.1_05589.t2 atgagcgttaatggcttgccgtccgtacataaatccaccaccaccacttccttcttgcagtcccggctgtacactattag tcggtccggatccggtgaagccttttacgtcatcataagtccgcatcatgacgaaatcttgtcgtaccaaatcagaatcg aacattggaaggctacgaagcacgtggctgattttggtgtagcagtttatagaaatgttctctatgttatcggaggattc aatatcaagacggcaaaacatttgaaaacagtggtcagatataatcccgatgatggactttggaaagaagtgcagtccat gccaacagccagagccaaatttgcaacagccgtacaggacggaaaaatcttagtattaggtggtgaaggtcaagacggca gagttacctcctcctgttattcatacgatccggagacggatgaatggacgatttcctcctcattagtgtcgcctagagcc aatcacgcatgcgtagtatgcaacaaagaaatttattgttccggtgggagatacgggaataaaagtcataaaaatatctg ggtgaaggagggaggggactgggaggatcttggaaggccgtacccccagaagctgcccgtcccactcgatagactagcga tgaccacctggaggagacaaatattctttgtcggcggagtatattgtaaaaaggatagaaaggacgaaaaacgtaaattc ctgactgaagcccggatgttttcatatacaaccagcgtgtcggccatgagctcatcacgtgacgaagcagacgatgggga agatgaatacattcaacaagaatttctgtcaccatggagattagatttaccaaatatgaattttggaagacacagtcatg gggcaatagctttaggtgacaagatctacgtgtttggaggcagccaattagagagtggcttacaagttagggaggtggag tttttcgatttgtgtaaaggagtatgggaagaggacttccgcttccggaaaggtgacgtttctaatgtgacttgtgcaat tctagaggttccttacaaacatgatgaacataaacttaatgcaaaattaaaatgggtcatgtggtag |
Protein
Protein ID | pfu_aug2.0_2581.1_05589.t1 |
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Definition | - |
>pfu_aug2.0_2581.1_05589.t1 MSVNGLPSVHKSTTTTSFLQSRLYTISRSGSGEAFYVIISPHHDEILSYQIRIEHWKATKHVADFGVAVYRNVLYVIGGF NIKTAKHLKTVVRYNPDDGLWKEVQSMPTARAKFATAVQDGKILVLGGEGQDGRVTSSCYSYDPETDEWTISSSLVSPRA NHACVVCNKEIYCSGGRYGNKSHKNIWVKEGGDWEDLGRPYPQKLPVPLDRLAMTTWRRQIFFVGGVYCKKDRKDEKRKF LTEARMFSYTTSVSAMSSSRDEADDGEDEYIQQEFLSPWRLDLPNMNFGRHSHGAIALGT |
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Protein ID | pfu_aug2.0_2581.1_05589.t2 |
Definition | - |
>pfu_aug2.0_2581.1_05589.t2 MSVNGLPSVHKSTTTTSFLQSRLYTISRSGSGEAFYVIISPHHDEILSYQIRIEHWKATKHVADFGVAVYRNVLYVIGGF NIKTAKHLKTVVRYNPDDGLWKEVQSMPTARAKFATAVQDGKILVLGGEGQDGRVTSSCYSYDPETDEWTISSSLVSPRA NHACVVCNKEIYCSGGRYGNKSHKNIWVKEGGDWEDLGRPYPQKLPVPLDRLAMTTWRRQIFFVGGVYCKKDRKDEKRKF LTEARMFSYTTSVSAMSSSRDEADDGEDEYIQQEFLSPWRLDLPNMNFGRHSHGAIALGDKIYVFGGSQLESGLQVREVE FFDLCKGVWEEDFRFRKGDVSNVTCAILEVPYKHDEHKLNAKLKWVMW |