Gene
| Gene Model ID | pfu_aug2.0_259.1_30525 |
|---|---|
| Locus | scaffold259.1 : 273564 ... 282262 : - |
| To GenomeBrowser | scaffold259.1:273564..282262 |
| Genes list of scaffold | scaffold259.1 |
| Synonym | pfu_aug1.0_15153.1_46840 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_259.1_30525.t2 | 2 | 1 | Hydrolase | 19 | 33 | 3.8e-22 | 79.7 | 2.3e-05 | 0.069 | 13.5 |
| pfu_aug2.0_259.1_30525.t2 | 1 | 1 | HAD | 21 | 418 | 5.6e-26 | 91.9 | 3.1e-29 | 9.1e-26 | 91.2 |
| pfu_aug2.0_259.1_30525.t2 | 1 | 1 | Hydrolase_like2 | 126 | 178 | 8.4e-06 | 25.6 | 6.2e-09 | 1.8e-05 | 24.5 |
| pfu_aug2.0_259.1_30525.t2 | 2 | 2 | Hydrolase | 204 | 420 | 3.8e-22 | 79.7 | 1.2e-19 | 3.5e-16 | 60.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_259.1_30525.t2 | gi|410924716|ref|XP_003975827.1| | 0.0 | |
| pfu_aug2.0_259.1_30525.t2 | gi|734650842|ref|XP_010754766.1| | PREDICTED: probable cation-transporting ATPase 13A3 isoform X2 [Larimichthys crocea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_259.1_30525.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_259.1_30525.t1 atgggaagcatcttctgtatcagtcctcgtagcattaatgtcagtggaacactaaacgctgtctgttttgataagacggg gacactgacagaggacgggttagatatgcatagcgttgtacctgcccacgatggaaaatttgatgaggagatatttgata tgtccagtattgaccgtggcccggtgctgaccgctatggctgcatgtcactcactgaccattattgacggacaactgacc ggggatcctctagagctcatcatgtttgaagctacaggatggacattagaggagcctggcgaggaggagtccagtaattt tgacagtatagtccctaccatagtcagacccagtgtccccagggctacatcctttgatgaggagtacaagccggtgtctg aggaagtgggaatcatgcgccagtttaccttcacttcgtctctacagcgtatgtccgtcatcatcaggaaacttggcgcg ccaaattttgaattatattgcaaaggcgcaccggaaatgatagcatccctctcaaaacaagaaacggttccagataattt ccatgagacattgatggcatatacacagcatggatacagagttctcgcccttggttacagatcacttcctgcgaaaataa aatatgctaagattcagcgaattcaaagagagcaggtcgagcgtgccctgacattccttggatttttagtgatggagaac aggctgaaacccgaaacaactccagttataaagaacttaaaggaatcaaacattagaaccatcatggtgacaggtgacaa catgttgactgcattaagcgtagctcgggagtgtgggatggtaaatccccaagataatatagtcctggtacaagccttcc cgggtgtggaaaacaagagtggaccatggttagagtacatgttcacggacgatgaaggcaagaaacggacacagatgtcc accagtaatatactagtaatttgtcaaaaagttgttggtatgataagccttgcccaagataccagattagacattgagac agctgacccctactttcactttgccatggatggtaaatcgtggtctgtagtcaggcaacactttcccggaatactgcaaa agatatgtgtaaggggtacagtgtttgctagaatgtcacctgaccaaaaagctcagttagtggaggagctacaagatcta ggatattacgtcggcatgtgtggtgacggagccaatgattgcggagcattaaagactgcgcatgcggggatatcactatc ggaagctgaagcatccgtggcatctccgttcacatcgaaaacaccaaatatagaatgtgttcctactttgataagggagg gacgagctgccttggtgacgtcatttggaatctttaagtacatggctttgtacagtctgacacaatttgtctccgtctgc atgttgtactggattttcaataacctgaccgatccagagtttttgtacatagatctgttccttctcacaagcctcagtgt aacattcggatttacagcggcttacccaacactaaccagggaacctcctcttgtaaacctctttagtatatcaccaattc tgtccctggttgttcatgtagccatttgtattggtcctcaagttttctgctacttcaatncagatgctattttggacttg attagaaacccgggaaaagagggtgctctggaattagcgaacaggacagtagatattgtttttcattttcgtgcgggaac atcgacggcgggtgcggctagcaaacaggggatgcttacgcctcccgggcacctggttccacctctagctttctag |
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| Transcript ID | pfu_aug2.0_259.1_30525.t2 |
| Definition | - |
>pfu_aug2.0_259.1_30525.t2 atgggaagcatcttctgtatcagtcctcgtagcattaatgtcagtggaacactaaacgctgtctgttttgataagacggg gacactgacagaggacgggttagatatgcatagcgttgtacctgcccacgatggaaaatttgatgaggagatatttgata tgtccagtattgaccgtggcccggtgctgaccgctatggctgcatgtcactcactgaccattattgacggacaactgacc ggggatcctctagagctcatcatgtttgaagctacaggatggacattagaggagcctggcgaggaggagtccagtaattt tgacagtatagtccctaccatagtcagacccagtgtccccagggctacatcctttgatgaggagtacaagccggtgtctg aggaagtgggaatcatgcgccagtttaccttcacttcgtctctacagcgtatgtccgtcatcatcaggaaacttggcgcg ccaaattttgaattatattgcaaaggcgcaccggaaatgatagcatccctctcaaaacaagaaacggttccagataattt ccatgagacattgatggcatatacacagcatggatacagagttctcgcccttggttacagatcacttcctgcgaaaataa aatatgctaagattcagcgaattcaaagagagcaggtcgagcgtgccctgacattccttggatttttagtgatggagaac aggctgaaacccgaaacaactccagttataaagaacttaaaggaatcaaacattagaaccatcatggtgacaggtgacaa catgttgactgcattaagcgtagctcgggagtgtgggatggtaaatccccaagataatatagtcctggtacaagccttcc cgggtgtggaaaacaagagtggaccatggttagagtacatgttcacggacgatgaaggcaagaaacggacacagatgtcc accagtaatatactagtaatttgtcaaaaagttgttggtatgataagccttgcccaagataccagattagacattgagac agctgacccctactttcactttgccatggatggtaaatcgtggtctgtagtcaggcaacactttcccggaatactgcaaa agatatgtgtaaggggtacagtgtttgctagaatgtcacctgaccaaaaagctcagttagtggaggagctacaagatcta ggatattacgtcggcatgtgtggtgacggagccaatgattgcggagcattaaagactgcgcatgcggggatatcactatc ggaagctgaagcatccgtggcatctccgttcacatcgaaaacaccaaatatagaatgtgttcctactttgataagggagg gacgagctgccttggtgacgtcatttggaatctttaagtacatggctttgtacagtctgacacaatttgtctccgtctgc atgttgtactggattttcaataacctgaccgatccagagtttttgtacatagatctgttccttctcacaagcctcagtgt aacattaagtcatcggatttacagcggcttacccaacactaaccagggaacctcctcttgtaaacctctttag |
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Protein
| Protein ID | pfu_aug2.0_259.1_30525.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_259.1_30525.t1 MGSIFCISPRSINVSGTLNAVCFDKTGTLTEDGLDMHSVVPAHDGKFDEEIFDMSSIDRGPVLTAMAACHSLTIIDGQLT GDPLELIMFEATGWTLEEPGEEESSNFDSIVPTIVRPSVPRATSFDEEYKPVSEEVGIMRQFTFTSSLQRMSVIIRKLGA PNFELYCKGAPEMIASLSKQETVPDNFHETLMAYTQHGYRVLALGYRSLPAKIKYAKIQRIQREQVERALTFLGFLVMEN RLKPETTPVIKNLKESNIRTIMVTGDNMLTALSVARECGMVNPQDNIVLVQAFPGVENKSGPWLEYMFTDDEGKKRTQMS TSNILVICQKVVGMISLAQDTRLDIETADPYFHFAMDGKSWSVVRQHFPGILQKICVRGTVFARMSPDQKAQLVEELQDL GYYVGMCGDGANDCGALKTAHAGISLSEAEASVASPFTSKTPNIECVPTLIREGRAALVTSFGIFKYMALYSLTQFVSVC MLYWIFNNLTDPEFLYIDLFLLTSLSVTFGFTAAYPTLTREPPLVNLFSISPILSLVVHVAICIGPQVFCYFNXDAILDL IRNPGKEGALELANRTVDIVFHFRAGTSTAGAASKQGMLTPPGHLVPPLAF |
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| Protein ID | pfu_aug2.0_259.1_30525.t2 |
| Definition | - |
>pfu_aug2.0_259.1_30525.t2 MGSIFCISPRSINVSGTLNAVCFDKTGTLTEDGLDMHSVVPAHDGKFDEEIFDMSSIDRGPVLTAMAACHSLTIIDGQLT GDPLELIMFEATGWTLEEPGEEESSNFDSIVPTIVRPSVPRATSFDEEYKPVSEEVGIMRQFTFTSSLQRMSVIIRKLGA PNFELYCKGAPEMIASLSKQETVPDNFHETLMAYTQHGYRVLALGYRSLPAKIKYAKIQRIQREQVERALTFLGFLVMEN RLKPETTPVIKNLKESNIRTIMVTGDNMLTALSVARECGMVNPQDNIVLVQAFPGVENKSGPWLEYMFTDDEGKKRTQMS TSNILVICQKVVGMISLAQDTRLDIETADPYFHFAMDGKSWSVVRQHFPGILQKICVRGTVFARMSPDQKAQLVEELQDL GYYVGMCGDGANDCGALKTAHAGISLSEAEASVASPFTSKTPNIECVPTLIREGRAALVTSFGIFKYMALYSLTQFVSVC MLYWIFNNLTDPEFLYIDLFLLTSLSVTLSHRIYSGLPNTNQGTSSCKPL |
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