Gene
| Gene Model ID | pfu_aug2.0_2591.1_05594 |
|---|---|
| Locus | scaffold2591.1 : 23303 ... 45025 : - |
| To GenomeBrowser | scaffold2591.1:23303..45025 |
| Genes list of scaffold | scaffold2591.1 |
| Synonym | pfu_aug1.0_1262.1_29648 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fibroblast growth factor receptor-like 1 | GO:0009653 GO:0021591 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2591.1_05594.t1 | 1 | 1 | I-set | 33 | 111 | 7.8e-15 | 54.5 | 7.8e-18 | 1.3e-14 | 53.8 |
| pfu_aug2.0_2591.1_05594.t1 | 1 | 1 | Ig_2 | 34 | 110 | 6.3e-08 | 32.6 | 7.6e-11 | 1.3e-07 | 31.6 |
| pfu_aug2.0_2591.1_05594.t1 | 1 | 1 | ig | 40 | 96 | 4.4e-06 | 26.7 | 8.2e-09 | 1.3e-05 | 25.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2591.1_05594.t1 | gi|676482819|ref|XP_009062826.1| | hypothetical protein LOTGIDRAFT_128829, partial [Lottia gigantea] | 1.0e-31 |
| pfu_aug2.0_2591.1_05594.t1 | gi|658872892|ref|XP_008419399.1| | PREDICTED: fibroblast growth factor receptor-like 1 [Poecilia reticulata] | 3.0e-30 |
| pfu_aug2.0_2591.1_05594.t1 | gi|617503947|ref|XP_007541431.1| | PREDICTED: fibroblast growth factor receptor-like 1 [Poecilia formosa] | 1.0e-29 |
| pfu_aug2.0_2591.1_05594.t1 | gi|58332080|ref|NP_001011189.1| | fibroblast growth factor receptor-like 1 precursor [Xenopus (Silurana) tropicalis] | 3.0e-29 |
| pfu_aug2.0_2591.1_05594.t1 | gi|170285308|gb|AAI61343.1| | fgfrl1 protein [Xenopus (Silurana) tropicalis] | 3.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_2591.1_05594.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2591.1_05594.t1 atggaccagaaaattttgatatatatgattgcaacattggttgccatggtaacagcagtcggtcccccacgttatatcgg agacagcaagtatcggcacgttgccagggtcaaccacaccaagaagctgttatgtccagtggaggcagagcccctcccca tggtccagtggctgaaggacggacaggacatcaacgagatgtgggagaggcaccgtgtgatgaaggacgggtcactcagg atcaaggacgttgtcatggaggacgctggacgatatgtgtgtagggccatcaacggattcggcagcatcaacataaacta tactctgattgttgtcgcagactccagatctggatatactaaagattcaggatcaatcagcttacccataataataggag ttcctgcctgtatagtgatctttatagtaactatagccattatagtgctacagaaacggaaaaggaataaatatcctgga aacgtcgtcaaaagtccacattttaatcgtgttcccacacatgaaccagattcatgtgtgcccccacaggggcataaccc acaaactaatatccatgtgaatcccatgcatggtgtacaacataaagacttgtatatgggcttacagagcccgcaacatt ctcagacaagcaatagagaccctttttctagcagggaacctttatcaaatagagacgctatgtcaaatagagacgctatg tcaaatagagacgcgctttccaaaaacagtcatagtatagacttttatacggacatatcctcggtgtcacaaagccatca caatcatcaccatatgcagcaatatccgtataactaa |
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Protein
| Protein ID | pfu_aug2.0_2591.1_05594.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2591.1_05594.t1 MDQKILIYMIATLVAMVTAVGPPRYIGDSKYRHVARVNHTKKLLCPVEAEPLPMVQWLKDGQDINEMWERHRVMKDGSLR IKDVVMEDAGRYVCRAINGFGSININYTLIVVADSRSGYTKDSGSISLPIIIGVPACIVIFIVTIAIIVLQKRKRNKYPG NVVKSPHFNRVPTHEPDSCVPPQGHNPQTNIHVNPMHGVQHKDLYMGLQSPQHSQTSNRDPFSSREPLSNRDAMSNRDAM SNRDALSKNSHSIDFYTDISSVSQSHHNHHHMQQYPYN |
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