Gene
| Gene Model ID | pfu_aug2.0_2595.1_18871 |
|---|---|
| Locus | scaffold2595.1 : 42296 ... 50421 : + |
| To GenomeBrowser | scaffold2595.1:42296..50421 |
| Genes list of scaffold | scaffold2595.1 |
| Synonym | pfu_aug1.0_1042.1_65755 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2595.1_18871.t1 | 3 | 1 | RNase_H_2 | 48 | 84 | 1.9e-07 | 31.0 | 1.3 | 4900.0 | -2.9 |
| pfu_aug2.0_2595.1_18871.t1 | 1 | 1 | RNase_T | 346 | 509 | 1.2e-10 | 41.8 | 1.4e-13 | 5.1e-10 | 39.8 |
| pfu_aug2.0_2595.1_18871.t1 | 3 | 2 | RNase_H_2 | 346 | 377 | 1.9e-07 | 31.0 | 3.7e-05 | 0.14 | 11.9 |
| pfu_aug2.0_2595.1_18871.t1 | 3 | 3 | RNase_H_2 | 393 | 496 | 1.9e-07 | 31.0 | 8.4e-07 | 0.0031 | 17.3 |
Transcript
| Transcript ID | pfu_aug2.0_2595.1_18871.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2595.1_18871.t1 atggttaatggtggatttggggaaagccatgtcaactccctgttggctgcgcttaacattcctgcaaaagaaatcacacc aaggaagcacaactgtataaagaactggtcagggtctgccaagtccatggagccggcaatggcttgtgaaatgttgcagg gtgttatagaccaaggtcataaaatcaacacccttgtcatggacaatgactccacaactatatcacgcgttaaagccact gtggaccctgatattacaaaaaagagtgacagcaatcatacaaaaaaaggatttacagggagcttaattgaccttagcaa cacccacaaagttttgaaaaaccaaaaagttcgccaacatattgaccgatgctttatgtattgcatacgccaggctgggg aggactcagagaaattatcaaatgaccttgagaaaattgttcctcatctatatggggatcatacagagtgtggttcttgg tgcagaagcgagaaaaatggatacaaaccaaagaatttgccctatggaaaacctttgtccaatgttccactgaaagatgc ccttgaaaatctgttaaggaagtatatatcaaaagctgatcagctggtatccatgggttcaactcaagtgaatgaaagtc tcaacaataaggtttcgagtaaggccccaaatcgcttgttctatggtggatcagagagtttgcagaccagattgtctgca acagtttgccaaaagaatgaaggttattcgtatatcactcagctgaatgaaagattggccatgtctccaggaagatttac cataaagcatacacaatcccttgaaagcaaactaaagatgaagcgattgagccagtccagcaggtcctcaaagagaagga gattagagctgaagattcagagagctgctaaagataccactcagtctgtacttgaagctgacacatatagcagcaagatt ggtttagaggaggatgtggatttagaggatatttctctggatatacccagtgtacttccatccaatagcccctatgtata ctttgatttggaaaccactggactagcaaggacatcagatataattcaactggcagcagttcataatgacaaggaactaa atctctatgtgagcccaaaatcacagataagccctgaagcttctgcagttactgggataacttatattggtaaagtcatg aaacacaacaacgaaatagtgcagtgcattgagcctcgggatgcgtacatactatttttggactttctagagagttttga gagaaagcctattctggttggacataatatccaagtatttgatttaccagtcttgatgaatcagctggtgaaattcgaca tgctggacaggtttaaggaaagtgtgctgggctttattgacacgcttaaactttctaagaaagtttttgataaaactgac gtgagcaattataagcagtcaacacttgtgacaactctactaggaattggttatgatgcacacaatgcacttgcagacgt caaagctttaaggttcattaagccgtcagcaaaagtgttccatgtttcctcttctaaatgtgaagcctga |
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Protein
| Protein ID | pfu_aug2.0_2595.1_18871.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2595.1_18871.t1 MVNGGFGESHVNSLLAALNIPAKEITPRKHNCIKNWSGSAKSMEPAMACEMLQGVIDQGHKINTLVMDNDSTTISRVKAT VDPDITKKSDSNHTKKGFTGSLIDLSNTHKVLKNQKVRQHIDRCFMYCIRQAGEDSEKLSNDLEKIVPHLYGDHTECGSW CRSEKNGYKPKNLPYGKPLSNVPLKDALENLLRKYISKADQLVSMGSTQVNESLNNKVSSKAPNRLFYGGSESLQTRLSA TVCQKNEGYSYITQLNERLAMSPGRFTIKHTQSLESKLKMKRLSQSSRSSKRRRLELKIQRAAKDTTQSVLEADTYSSKI GLEEDVDLEDISLDIPSVLPSNSPYVYFDLETTGLARTSDIIQLAAVHNDKELNLYVSPKSQISPEASAVTGITYIGKVM KHNNEIVQCIEPRDAYILFLDFLESFERKPILVGHNIQVFDLPVLMNQLVKFDMLDRFKESVLGFIDTLKLSKKVFDKTD VSNYKQSTLVTTLLGIGYDAHNALADVKALRFIKPSAKVFHVSSSKCEA |
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