Gene
| Gene Model ID | pfu_aug2.0_2595.1_18872 |
|---|---|
| Locus | scaffold2595.1 : 50594 ... 79805 : - |
| To GenomeBrowser | scaffold2595.1:50594..79805 |
| Genes list of scaffold | scaffold2595.1 |
| Synonym | pfu_aug1.0_791.1_43828 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2595.1_18872.t1 | 4 | 1 | DNA_pol_phi | 53 | 414 | 4.5e-28 | 97.5 | 4.8e-20 | 3.5e-16 | 58.1 |
| pfu_aug2.0_2595.1_18872.t1 | 4 | 2 | DNA_pol_phi | 526 | 565 | 4.5e-28 | 97.5 | 0.045 | 330.0 | -1.3 |
| pfu_aug2.0_2595.1_18872.t1 | 4 | 3 | DNA_pol_phi | 625 | 809 | 4.5e-28 | 97.5 | 1.8e-18 | 1.3e-14 | 52.9 |
| pfu_aug2.0_2595.1_18872.t1 | 4 | 4 | DNA_pol_phi | 877 | 940 | 4.5e-28 | 97.5 | 0.17 | 1200.0 | -3.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2595.1_18872.t1 | gi|524898475|ref|XP_005105686.1| | PREDICTED: myb-binding protein 1A-like protein-like [Aplysia californica] | 8.99998e-41 |
| pfu_aug2.0_2595.1_18872.t1 | gi|291222407|ref|XP_002731208.1| | PREDICTED: myb-binding protein 1A-like protein-like [Saccoglossus kowalevskii] | 6.0e-36 |
| pfu_aug2.0_2595.1_18872.t1 | gi|390349199|ref|XP_003727165.1| | 9.0e-34 | |
| pfu_aug2.0_2595.1_18872.t1 | gi|156397064|ref|XP_001637712.1| | predicted protein [Nematostella vectensis] | 1.0e-30 |
| pfu_aug2.0_2595.1_18872.t1 | gi|390367880|ref|XP_001193675.2| | 5.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_2595.1_18872.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2595.1_18872.t1 atgtcacaaggcaaattaaacatcgagaaaagcattttagaacaattttgggtacttgcagaatcaaatgaacaaggaat tttgtcatccaccgaaaaacttacaaagcaacttgcaaacaaacaagagaacttacagggagagacatgcaaggagttga agtattctgtagaccgactagtaaagggattagcttccagtagacagtcagcgagacatggattctctgtggctctctgt cagattttgcgaaatttcagcactgtgacagtggactccgttttacaggcagtggctatgcaattgaaatatacacagaa agagtctaagtctgaacaaggaaatattcttcttgggaagaccttagcatatttagccctgattcagtccggtagactct gccagaatcaggagtcacagcttcaaaaagtgaccaaacatttgttggaaatcaaaaagaagaaatcctatcttcaacag atttgcacaaatgctgttgctttagcgatcagtcaggttgatactgaaacttttaagggttacatatatcccgagataga gagtgatttgatccaaggctgggaagcatgtacaccggactccttcctcctcctgttgtcctgttataaacaccaatccg aaactgtcaataagaaattcctgaaacagtactggcattgctcgaagctgatatctaacgacaattttgaaagactgtgg aaaatcataatgcaaactgcggtccatccagtacgacacatggttgtagaccagattgttgatggaatcctagagatgcc ctcttctgtatcagatttctggagctgtggacttgatctaacgtttgggaaagccccttcaagtgcagctctcggacttc atgtgttactgaaaattcttccttgtgttcaaagtgttgatcaggttgatactgaaacttttaagggttacatatatccc gagatagagagtgatttgatccaaggctgggaagcatgtacaccggactccttcctcctcctgttgtcctgttataaaca ccaatccgaaactgtcaataagaaattcctgaaacagtactggcattgctcgaagctgatatctaacgacaattttgaaa gactgtggaaaatcataatgtgcaaccatattttagcggaaacagagcagaattggcaaactgcggtccatccagtacga cacatggttgtagaccagattgttgatggaatcctagagatgccctcttctgtatcagatttctggagctgtggacttga tctaacgtttgggaaagccccttcaagtgcagctctcggacttcatgtgttactgaaaattcttccttgtgttcaaagtg ttgatcaggtgaatagcatactagtgccatccgtttttgatacgttgacaaaagccgtagacagcaagaagaaaagcagt catccgttacatactgtggcaaaagaaacgattgaggcacttacactgacaataaagcagtttacagatggagatttgca gctggctgtattgaaatgtttagaggcttcctctctcagaatggggaaggaaatgaacgtcatcaaagattccgtactca gttctttgaaacctgatgctgtcaagacacattcacaacatctactcaaagtatttcacaagctcaacaagcaaaatgag gatgaagaaaatgatgccaaaatcttcatggttatcaccgatatacgcaccctcgtcagtttacagtccatgatcggaga gaatgattggcagatccatttgttgaagttcttggccgtacactcctactggaacgttacaaagaaaaccgctgatcttg cccattgtgaaaaggaaacaaagactctaagtacggcagtaagaaaactgttccaggacagcttctttagaactcttgat aatctactacttcataaaggagagagatcaaagtcaacagcattgaatgattacatagataatatatatcaactctgtat gtacatgaaggaattgacagaaagagagacctgtgtggcttggactggtgccaatatgcagaaaaaggttttaaatcagt gggacagctctttaagtgtgatagcttccatcaaagaaaagctgaaaccagaagagagttcaggcattcaccagtgtctg gcgttacttatcctatatcactgtgttcagttgctggtacaaccaagaaatcacttgtctgttttagaggatctgaaagt ctgtcatgaaaaaataactaaggcgaaaggtcgtaagagttcaaaagaagaacctaaatggatagaggtgataatggaag ttttattgagtatgatgtcacagggctcgaacctggccagagtgacggctaaagcagcatttggacttacatgtgaacat actacgcctgactcacttaagttcatcacagaggacttgatcttcccattattacggctgatgatgtcacaggagaaaga caaggatcagagacagataggtcataaagctcaaaatgtcctcaaaatgctgtataaaaaagctgaggtgcatggtcaaa ttcctatggataaagagagatatgtggagggaatcaaggaggcaatagaaatgtccacaaaagtttcaggtcaccatctg gtactatgtgtatccaatgccacccttcttatggtgaggctgctactgaacctagagatggagagtgcagagccatcacc cgtaaaaacccggtcacagagggttcatactgagaaaatttctgtcgaagaacagaatcaaaaagacaaagaaagattac agcaagaaatgttagaaattataggaaaaagactaattgatctcgtgcataaaaatgaaagcaaactccatcaaggattc tttgaaaacatgttcacaaagtaccctgtcttgttttggccaatgacagacattttactgaaggcaggaatggacaaaga tatcaaggtttttggtagaagtcaggctgtgtccctactgattccgtttgtcaacaaagtatctgtaagtaaatgctaca ttcttatatag |
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Protein
| Protein ID | pfu_aug2.0_2595.1_18872.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2595.1_18872.t1 MSQGKLNIEKSILEQFWVLAESNEQGILSSTEKLTKQLANKQENLQGETCKELKYSVDRLVKGLASSRQSARHGFSVALC QILRNFSTVTVDSVLQAVAMQLKYTQKESKSEQGNILLGKTLAYLALIQSGRLCQNQESQLQKVTKHLLEIKKKKSYLQQ ICTNAVALAISQVDTETFKGYIYPEIESDLIQGWEACTPDSFLLLLSCYKHQSETVNKKFLKQYWHCSKLISNDNFERLW KIIMQTAVHPVRHMVVDQIVDGILEMPSSVSDFWSCGLDLTFGKAPSSAALGLHVLLKILPCVQSVDQVDTETFKGYIYP EIESDLIQGWEACTPDSFLLLLSCYKHQSETVNKKFLKQYWHCSKLISNDNFERLWKIIMCNHILAETEQNWQTAVHPVR HMVVDQIVDGILEMPSSVSDFWSCGLDLTFGKAPSSAALGLHVLLKILPCVQSVDQVNSILVPSVFDTLTKAVDSKKKSS HPLHTVAKETIEALTLTIKQFTDGDLQLAVLKCLEASSLRMGKEMNVIKDSVLSSLKPDAVKTHSQHLLKVFHKLNKQNE DEENDAKIFMVITDIRTLVSLQSMIGENDWQIHLLKFLAVHSYWNVTKKTADLAHCEKETKTLSTAVRKLFQDSFFRTLD NLLLHKGERSKSTALNDYIDNIYQLCMYMKELTERETCVAWTGANMQKKVLNQWDSSLSVIASIKEKLKPEESSGIHQCL ALLILYHCVQLLVQPRNHLSVLEDLKVCHEKITKAKGRKSSKEEPKWIEVIMEVLLSMMSQGSNLARVTAKAAFGLTCEH TTPDSLKFITEDLIFPLLRLMMSQEKDKDQRQIGHKAQNVLKMLYKKAEVHGQIPMDKERYVEGIKEAIEMSTKVSGHHL VLCVSNATLLMVRLLLNLEMESAEPSPVKTRSQRVHTEKISVEEQNQKDKERLQQEMLEIIGKRLIDLVHKNESKLHQGF FENMFTKYPVLFWPMTDILLKAGMDKDIKVFGRSQAVSLLIPFVNKVSVSKCYILI |
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