Gene
| Gene Model ID | pfu_aug2.0_26.1_20078 |
|---|---|
| Locus | scaffold26.1 : 267757 ... 280495 : - |
| To GenomeBrowser | scaffold26.1:267757..280495 |
| Genes list of scaffold | scaffold26.1 |
| Synonym | pfu_aug1.0_1057.1_65765 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| t-box transcription factor tbx20 | GO:0001085 GO:0003008 GO:0003143 GO:0003151 GO:0003176 GO:0003179 GO:0003203 GO:0003677 GO:0003700 GO:0005634 GO:0006357 GO:0007389 GO:0007517 GO:0008283 GO:0045892 GO:0045893 GO:0048514 GO:0048646 GO:0048699 GO:0048738 GO:0060411 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_26.1_20078.t1 | 1 | 1 | T-box | 131 | 325 | 0.0 | 279.6 | 0.0 | 0.0 | 279.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_26.1_20078.t1 | gi|676482544|ref|XP_009062736.1| | hypothetical protein LOTGIDRAFT_179359 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_26.1_20078.t1 | gi|45383824|ref|NP_989475.1| | T-box transcription factor TBX20 [Gallus gallus] | 0.0 |
| pfu_aug2.0_26.1_20078.t1 | gi|729724411|ref|XP_010581026.1| | PREDICTED: T-box transcription factor TBX20 [Haliaeetus leucocephalus] | 0.0 |
| pfu_aug2.0_26.1_20078.t1 | gi|701427185|ref|XP_010002662.1| | PREDICTED: T-box transcription factor TBX20 [Chaetura pelagica] | 0.0 |
| pfu_aug2.0_26.1_20078.t1 | gi|663290742|ref|XP_008501596.1| | PREDICTED: T-box transcription factor TBX20 [Calypte anna] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_26.1_20078.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_26.1_20078.t1 atggaatctacgtgtaattctgaggagaattccagaatagatgttttacccggcatggacgtgggtccgagctcgcccaa taagacccctctctcatctaaggctacagctttttctattgccgctattatgggaggggagcggaaccagggtgtggaac agtaccctagtacctccctagaacgctccgaatctgcattttccactgaaatccctcctgtaccaaaaataccagaagca cgagtgtcgccctctataattgttccaaaggatttgaaagatgcaattccagttccgaaagaggacatctctaaaacgga accggaaacagatcacgatgaagtatctacgacaacttcaccggcctgtagcagagaacttgccggaatccaatgccgat tggaaaccaaagatttgtgggacaaatttcacgagctgggaacagagatgatcattacaaagactgggaggcggatgttc cccacccttcgagtatctttcactggtatagacccggaagtacgatatatggtcctgatggatatagtcccggttgacaa caagagatatcgctacgcctatcaccgatcttcctggttagtcgccggaaaagcagacccaccactacctacgcggctct atatgcacccagactccccgtacacaggggaacaactacagaaacaaacagtgtcatttgaaaaattaaaactgaccaat aacatgctggataaaaatggacacataattttgaattcgatgcacaaataccaaccacgaattcacatagtaaagaagaa ggaggggagtggtggaggaggggcaggaggttccattaccagtctggacgctgaagaattcaagacatttatatttccgg aatcagtattcattgccgtcacagcataccagaatcaacttataacaaagcttaagattgacagtaatccatttgcaaag ggattccgcgattctacaagacttacagaatttgagagcgccttggaaaaacaaggaatgcttccgcatccccactggcc cgtgtggcgacccataccgtcgagcctggttgggtcagcatccccttatctacccaacgatagatccttatactcattat acgggggactatttggaataaacacaaactttatgttcccatccgttgcatttcattctttagtcagtgcgaacaatttg agactacgtgattcgattcccgccagtgcttctacgtatacttctccggaacccaccggacttcatcatccgccggcagc ttaccgctaccatccttatctcacgccggataaaatcagcgccgcacagaagtctgcggaatcatcggtcacggacacct gtcgaccgtaa |
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Protein
| Protein ID | pfu_aug2.0_26.1_20078.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_26.1_20078.t1 MESTCNSEENSRIDVLPGMDVGPSSPNKTPLSSKATAFSIAAIMGGERNQGVEQYPSTSLERSESAFSTEIPPVPKIPEA RVSPSIIVPKDLKDAIPVPKEDISKTEPETDHDEVSTTTSPACSRELAGIQCRLETKDLWDKFHELGTEMIITKTGRRMF PTLRVSFTGIDPEVRYMVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPTRLYMHPDSPYTGEQLQKQTVSFEKLKLTN NMLDKNGHIILNSMHKYQPRIHIVKKKEGSGGGGAGGSITSLDAEEFKTFIFPESVFIAVTAYQNQLITKLKIDSNPFAK GFRDSTRLTEFESALEKQGMLPHPHWPVWRPIPSSLVGSASPYLPNDRSLYSLYGGLFGINTNFMFPSVAFHSLVSANNL RLRDSIPASASTYTSPEPTGLHHPPAAYRYHPYLTPDKISAAQKSAESSVTDTCRP |
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