Gene
| Gene Model ID | pfu_aug2.0_26.1_20079 |
|---|---|
| Locus | scaffold26.1 : 308782 ... 314195 : - |
| To GenomeBrowser | scaffold26.1:308782..314195 |
| Genes list of scaffold | scaffold26.1 |
| Synonym | pfu_aug1.0_1057.1_65763 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| t-box transcription factor tbx20 | GO:0003677 GO:0003700 GO:0005634 GO:0006355 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_26.1_20079.t1 | 1 | 1 | T-box | 1 | 162 | 0.0 | 223.7 | 0.0 | 0.0 | 223.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_26.1_20079.t1 | gi|697496646|ref|XP_009677980.1| | PREDICTED: T-box transcription factor TBX20 [Struthio camelus australis] | 0.0 |
| pfu_aug2.0_26.1_20079.t1 | gi|701389198|ref|XP_009989394.1| | PREDICTED: T-box transcription factor TBX20, partial [Tauraco erythrolophus] | 0.0 |
| pfu_aug2.0_26.1_20079.t1 | gi|723534805|ref|XP_010310231.1| | PREDICTED: T-box transcription factor TBX20, partial [Balearica regulorum gibbericeps] | 0.0 |
| pfu_aug2.0_26.1_20079.t1 | gi|676482542|ref|XP_009062735.1| | hypothetical protein LOTGIDRAFT_129083 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_26.1_20079.t1 | gi|727015147|ref|XP_010397032.1| | PREDICTED: T-box transcription factor TBX20 [Corvus cornix cornix] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_26.1_20079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_26.1_20079.t1 atgtttcctactttacgggtgtcgttttccggactggaaccggaagcacagtatatcgttgccatggatatagtcccggt tgacaacaagagatatcgctacgcctaccacaggtcgtcttggttagtcgccggaaaggccgacccaccacaacctgcca gattatgcatccaccctgatgtcccattcagtggtcagcaactccaaaaacagaccatctcgtttgaaaagttaaaactg accaataacatgatggacaaatctggacatattattctgaattccatgcacaaatatcagccaagaatccatcttataaa gaagtccgattccactccaaacccactcacatcattggaatccgaggagcaccgaacgtttcttttctcggaaacaaaat tcattgccgtcacagcctaccaaaaccaactgatcacaaaattgaagattgacagcaatccgttcgccaaaggtttccgt gattctagcagactatctgacattgaaagggagacaatggaaaccttgatgcacagtcattcttacctcagaggtccact gtcaatggtcagtgacgaaatggctaaacacagagaagccctgttggccaggggaattgcagatcctgccctcgctttgt ctcttcttcacggttcaaatctcatcgctgcagcgccacctcagcctcaacatgaacgacaactccagtctccatttccg gtcgtgtatccattctcagaacagcatcaccctaacatgggcacgaaaacgttaccaaacgacaaaccaatgttctttgg ctgttcaagaagcagagcacgactgatagagctatcgagattgcctgtaccccgacttctaaaagggggaaaaggtgtga gaacagagacaaaacgacaccacaaagtttaa |
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Protein
| Protein ID | pfu_aug2.0_26.1_20079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_26.1_20079.t1 MFPTLRVSFSGLEPEAQYIVAMDIVPVDNKRYRYAYHRSSWLVAGKADPPQPARLCIHPDVPFSGQQLQKQTISFEKLKL TNNMMDKSGHIILNSMHKYQPRIHLIKKSDSTPNPLTSLESEEHRTFLFSETKFIAVTAYQNQLITKLKIDSNPFAKGFR DSSRLSDIERETMETLMHSHSYLRGPLSMVSDEMAKHREALLARGIADPALALSLLHGSNLIAAAPPQPQHERQLQSPFP VVYPFSEQHHPNMGTKTLPNDKPMFFGCSRSRARLIELSRLPVPRLLKGGKGVRTETKRHHKV |
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