Gene
| Gene Model ID | pfu_aug2.0_26.1_20082 |
|---|---|
| Locus | scaffold26.1 : 476864 ... 495938 : - |
| To GenomeBrowser | scaffold26.1:476864..495938 |
| Genes list of scaffold | scaffold26.1 |
| Synonym | pfu_aug1.0_3006.1_51856 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_26.1_20082.t1 | 1 | 1 | Transglut_N | 47 | 168 | 7.4e-29 | 100.2 | 2.4e-32 | 1.2e-28 | 99.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_26.1_20082.t1 | gi|564258126|ref|XP_006268003.1| | PREDICTED: coagulation factor XIII A chain [Alligator mississippiensis] | 3.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_26.1_20082.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_26.1_20082.t1 atggatggagcgaggagcggtgacggtcggcgaaggtccgatggagaatctggtgacgatgcaaagcctatatcgttagc cgaacacttgcgaaggaacggtcgtatggttgacgagccgtacggggacctgcagaccgtatatgtggatttaatgatca atgagaattctacgaatcacaacacagacaaatacacagaggacatagatagtgataacagacccttgagtagatttgta gtgagacgaggatttcctttccacattaagattttgttcacaaggccattcaatttggagaaagatcgtttgaaacttgt cttcacgacaggtgaaaatcctcttcctggtgacagaacgtttgtttcactgatcccttcaaaacctgaatctcatggaa attggggagcagaaattctaggaggatctgagaatgaacttacagtcgcgatacaaactcctccagattgcattgtatca aagtggaatttggaggttcaaattctggaagagacggaaaccgatgtaatcacccatacaaactccaaaatattccctat ggatatttatattcttttcaatccatggaataaagctgacactgtattccttgaaagcgatgaatgtagggaggagtacg tccttaacgatgaaggtaatgtttgggtcggagatcgttacaatggcaaagattggtccttcaagcagatttttaacatt ttgatcgacaactgttacatttttgtggtgtttggaggaaaggtcttccagcaaattgtcggaattccaatggggaccaa atgtgccccactccttgccgacattttcctttactcgtacgaagctgaattcattcaatctttggtctctgaagggaaaa gatacctagctcctgacttcaacttcacttacagatacatagacgatgtgttgtccatcaatgatccaaaattcgcggat tatctgagcagtatctatccttcagagcttgaagtcaaagaaacgacagagacaaatagttcagcatcctatttggacat aatgctgtcgtacgacactgatggtcacatgaacacctcactctatgacaaacgtgacgacttcaatttcaccattacaa actttccctttctgagtagcaacatcccttcatcgccagcttatggtgcgttcatatctcagttgatacgctatgcaaga gcaagtaccaaatatacggattttgttctgagagctaggcgtctttcagataagcttctcagtcagggatatgtttgtga ccgactaacatcgtcactgaggaagttctacggtcgatatggggaactcgtcatacactatgatgtcccgcactcgagaa tggtggatgatattctgtcatag |
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Protein
| Protein ID | pfu_aug2.0_26.1_20082.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_26.1_20082.t1 MDGARSGDGRRRSDGESGDDAKPISLAEHLRRNGRMVDEPYGDLQTVYVDLMINENSTNHNTDKYTEDIDSDNRPLSRFV VRRGFPFHIKILFTRPFNLEKDRLKLVFTTGENPLPGDRTFVSLIPSKPESHGNWGAEILGGSENELTVAIQTPPDCIVS KWNLEVQILEETETDVITHTNSKIFPMDIYILFNPWNKADTVFLESDECREEYVLNDEGNVWVGDRYNGKDWSFKQIFNI LIDNCYIFVVFGGKVFQQIVGIPMGTKCAPLLADIFLYSYEAEFIQSLVSEGKRYLAPDFNFTYRYIDDVLSINDPKFAD YLSSIYPSELEVKETTETNSSASYLDIMLSYDTDGHMNTSLYDKRDDFNFTITNFPFLSSNIPSSPAYGAFISQLIRYAR ASTKYTDFVLRARRLSDKLLSQGYVCDRLTSSLRKFYGRYGELVIHYDVPHSRMVDDILS |
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