Gene
| Gene Model ID | pfu_aug2.0_2611.1_05600 |
|---|---|
| Locus | scaffold2611.1 : 51578 ... 75305 : - |
| To GenomeBrowser | scaffold2611.1:51578..75305 |
| Genes list of scaffold | scaffold2611.1 |
| Synonym | pfu_aug1.0_8326.1_09743 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein rop isoform x1 | GO:0006904 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2611.1_05600.t2 | 2 | 1 | Sec1 | 25 | 262 | 0.0 | 427.4 | 0.0 | 0.0 | 235.5 |
| pfu_aug2.0_2611.1_05600.t2 | 2 | 2 | Sec1 | 259 | 546 | 0.0 | 427.4 | 0.0 | 0.0 | 192.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2611.1_05600.t2 | gi|752873981|ref|XP_011254294.1| | PREDICTED: protein ROP isoform X1 [Camponotus floridanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2611.1_05600.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2611.1_05600.t1 atggcgctgaagtcggctgtcaaagaaaaggtgatgaacgatgtgatagcccaagtaaggaaggaaacagaatggaaggt gatggtggtggaccagctcagtaaaagaatgatctctgcatgctgtaaaatgcacgagattatgtctgaaggaatcacat tggttgaagatatcaacaagaggagagagccattagcacaactagaggcagtatatcttataacacctacagataagtct gtgaatgcattaaagaatgacttttcaaatccaaacaacactcagtacaaagctgctcatgtttactttacagaggcatg cccggatgtgttatttaatgatctgtgtaaatcgtccgtagcaaagtttataaaaacactgaaagaaatcaacattgcat tcttaccgtatgagtcccaggtgttttctctggattctcaagagacattccagttttattataatccgtcacgacagaat gggcgtgtcctaaaccttgagagatgtgctgaacagatagctacgttatgtgctacactaggagaatacccctcagtcag atatagaagtgagtttgacagaaatgcagagtttgcccagatggttcagcagaaacttgatgcttacagagctgacgacc ataccatgggggagggtccccaaaaagatcgttcacagttattaatcattgatagaggatttgacccaatatctccatta ctgcacgaactaacattccaggctatggcttatgacttactacctatagaaaatgatgtatacaggcaagtaaccaaaca gctgaaacagtttgcacaaagcaagaaaatgaatgatggtgaaaaggctaacattagagatctgtcccaaatgttgaaga aaatgccgcaataccagaaagaactgagtaaatactctacccacttacacttggcagaggattgtatgaagtcgtacaag aaacatgtggatagattatgtaaggtggaacaggatttagcattaggaacagatccagatggtgagaagatcaaagatca catgaggaacattgttccgatattactggaccaaaacattacagcatacgataaaattagaatcatacttctatacatca tacataaaggaggaataacggaggaaaatttggccaagttagtgcaacatgctcagattccggcagaagaaaaatgtatt atcaattatatgcagaatttaggagttccaatcattcaagatcaagaagaggaagagaagaaggagagtaaaataaattt gagtaagatgttgggaggaaagaagaaatcgtcaccgtaccagccatacaacaggaaggcacgtaagacggagaatatgt accagatgtcacgatggacaccatatatcaaggatattatggaggatgcagttgatgagaagttagatacgagaggtttc ccgtttctgtcaggaggagccccacgatctgccgcctataagccaccagtcagtgtaagatatggtcactggcataaaga caaaggtcagagtggctataagagtggaccacgtctgatggtgtttatcatagggggcgtgtccttctcagagatgaggt gtgcgtacgaagtgacacaaaactgtaaaaactgggaggttttagtaggatcaactcatctcctgactccggaaggtttc cttggtgacctgaagaaactttctgtcaatctccagtga |
|
| Transcript ID | pfu_aug2.0_2611.1_05600.t2 |
| Definition | - |
>pfu_aug2.0_2611.1_05600.t2 atggcgctgaagtcggctgtcaaagaaaaggtgatgaacgatgtgatagcccaagtaaggaaggaaacagaatggaaggt gatggtggtggaccagctcagtaaaagaatgatctctgcatgctgtaaaatgcacgagattatgtctgaaggaatcacat tggttgaagatatcaacaagaggagagagccattagcacaactagaggcagtatatcttataacacctacagataagtct gtgaatgcattaaagaatgacttttcaaatccaaacaacactcagtacaaagctgctcatgtttactttacagaggcatg cccggatgtgttatttaatgatctgtgtaaatcgtccgtagcaaagtttataaaaacactgaaagaaatcaacattgcat tcttaccgtatgagtcccaggtgttttctctggattctcaagagacattccagttttattataatccgtcacgacagaat gggcgtgtcctaaaccttgagagatgtgctgaacagatagctacgttatgtgctacactaggagaatacccctcagtcag atatagaagtgagtttgacagaaatgcagagtttgcccagatggttcagcagaaacttgatgcttacagagctgacgacc ataccatgggggagggtccccaaaaagatcgttcacagttattaatcattgatagaggatttgacccaatatctccatta ctgcacgaactaacattccaggctatggcttatgacttactacctatagaaaatgatgtatacaggcaagtaaccaaaca gctgaaacagtttgcacaaagcaagaaaatgaatgatggtgaaaaggctaacattagagatctgtcccaaatgttgaaga aaatgccgcaataccagaaagaactgagtaaatactctacccacttacacttggcagaggattgtatgaagtcgtacaag aaacatgtggatagattatgtaaggtggaacaggatttagcattaggaacagatccagatggtgagaagatcaaagatca catgaggaacattgttccgatattactggaccaaaacattacagcatacgataaaattagaatcatacttctatacatca tacataaaggaggaataacggaggaaaatttggccaagttagtgcaacatgctcagattccggcagaagaaaaatgtatt atcaattatatgcagaatttaggagttccaatcattcaagatggaggaaagaagaaatcgtcaccgtaccagccatacaa caggaaggcacgtaagacggagaatatgtaccagatgtcacgatggacaccatatatcaaggatattatggaggatgcag ttgatgagaagttagatacgagaggtttcccgtttctgtcaggaggagccccacgatctgccgcctataagccaccagtc agtgtaagatatggtcactggcataaagacaaaggtcagagtggctataagagtggaccacgtctgatggtgtttatcat agggggcgtgtccttctcagagatgaggtgtgcgtacgaagtgacacaaaactgtaaaaactgggaggttttagtaggat caactcatctcctgactccggaaggtttccttggtgacctgaagaaactttctgtcaatctccagtga |
|
Protein
| Protein ID | pfu_aug2.0_2611.1_05600.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2611.1_05600.t1 MALKSAVKEKVMNDVIAQVRKETEWKVMVVDQLSKRMISACCKMHEIMSEGITLVEDINKRREPLAQLEAVYLITPTDKS VNALKNDFSNPNNTQYKAAHVYFTEACPDVLFNDLCKSSVAKFIKTLKEINIAFLPYESQVFSLDSQETFQFYYNPSRQN GRVLNLERCAEQIATLCATLGEYPSVRYRSEFDRNAEFAQMVQQKLDAYRADDHTMGEGPQKDRSQLLIIDRGFDPISPL LHELTFQAMAYDLLPIENDVYRQVTKQLKQFAQSKKMNDGEKANIRDLSQMLKKMPQYQKELSKYSTHLHLAEDCMKSYK KHVDRLCKVEQDLALGTDPDGEKIKDHMRNIVPILLDQNITAYDKIRIILLYIIHKGGITEENLAKLVQHAQIPAEEKCI INYMQNLGVPIIQDQEEEEKKESKINLSKMLGGKKKSSPYQPYNRKARKTENMYQMSRWTPYIKDIMEDAVDEKLDTRGF PFLSGGAPRSAAYKPPVSVRYGHWHKDKGQSGYKSGPRLMVFIIGGVSFSEMRCAYEVTQNCKNWEVLVGSTHLLTPEGF LGDLKKLSVNLQ |
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| Protein ID | pfu_aug2.0_2611.1_05600.t2 |
| Definition | - |
>pfu_aug2.0_2611.1_05600.t2 MALKSAVKEKVMNDVIAQVRKETEWKVMVVDQLSKRMISACCKMHEIMSEGITLVEDINKRREPLAQLEAVYLITPTDKS VNALKNDFSNPNNTQYKAAHVYFTEACPDVLFNDLCKSSVAKFIKTLKEINIAFLPYESQVFSLDSQETFQFYYNPSRQN GRVLNLERCAEQIATLCATLGEYPSVRYRSEFDRNAEFAQMVQQKLDAYRADDHTMGEGPQKDRSQLLIIDRGFDPISPL LHELTFQAMAYDLLPIENDVYRQVTKQLKQFAQSKKMNDGEKANIRDLSQMLKKMPQYQKELSKYSTHLHLAEDCMKSYK KHVDRLCKVEQDLALGTDPDGEKIKDHMRNIVPILLDQNITAYDKIRIILLYIIHKGGITEENLAKLVQHAQIPAEEKCI INYMQNLGVPIIQDGGKKKSSPYQPYNRKARKTENMYQMSRWTPYIKDIMEDAVDEKLDTRGFPFLSGGAPRSAAYKPPV SVRYGHWHKDKGQSGYKSGPRLMVFIIGGVSFSEMRCAYEVTQNCKNWEVLVGSTHLLTPEGFLGDLKKLSVNLQ |
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