Gene
| Gene Model ID | pfu_aug2.0_2611.1_05601 |
|---|---|
| Locus | scaffold2611.1 : 75536 ... 90352 : + |
| To GenomeBrowser | scaffold2611.1:75536..90352 |
| Genes list of scaffold | scaffold2611.1 |
| Synonym | pfu_aug1.0_41154.1_55803 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2611.1_05601.t1 | 2 | 1 | FtsJ | 110 | 315 | 2.0e-26 | 93.0 | 5.9e-29 | 4.4e-25 | 88.7 |
| pfu_aug2.0_2611.1_05601.t1 | 2 | 2 | FtsJ | 621 | 691 | 2.0e-26 | 93.0 | 0.022 | 160.0 | 2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2611.1_05601.t1 | gi|471412604|ref|XP_004387851.1| | PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 [Trichechus manatus latirostris] | 0.0 |
| pfu_aug2.0_2611.1_05601.t1 | gi|542164366|ref|XP_005490809.1| | PREDICTED: ftsJ methyltransferase domain-containing protein 1 [Zonotrichia albicollis] | 0.0 |
| pfu_aug2.0_2611.1_05601.t1 | gi|683913885|ref|XP_009088931.1| | PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 [Serinus canaria] | 0.0 |
| pfu_aug2.0_2611.1_05601.t1 | gi|669288425|ref|XP_008637104.1| | PREDICTED: cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 [Corvus brachyrhynchos] | 0.0 |
| pfu_aug2.0_2611.1_05601.t1 | gi|594073319|ref|XP_006060480.1| | PREDICTED: ftsJ methyltransferase domain-containing protein 1 isoform X1 [Bubalus bubalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2611.1_05601.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2611.1_05601.t1 atggataggaagagaaaaagctccaacactaccatctctaatctggacttactgtcacggaccaaagctgagaagttgtt tcagaagaaggcatcatatgtgaaggacaaggatatagagtggcatctaccaaaccctcaagctgtgggatctacgggtc ctgtgtggactgtgacagaattacaggacctcaaacttaaacttaataatctgaaggataaactgagtgacaaggaaatc tctgaatggcacagccacacacagtttatgaattttgccggcaatattgttcaggatgtccgtcagcagattcaccccga gctctgtactcaggcttggtgtaaattctacgagataatatccacgtatgaattggtagattttgattcgtcaaatttca atactgttcatctttgtgaagccccaggagcttttgtcacaagcttgaatcattttctgatatcgaatgattacggaggt acatggacgtggtatgccaatacactgaatccctggtacgagggaaactccgttggggagatgatcgacgacgaccattt tatacgtgacacggcagactattggtactttggacctgacaacacagggaatataatggacctcaacaacctgaaatgtc tggtggaaaagtgtcaagaaatgggcaatattcatttggtgacagcagatggttctatagactgtcaggatgacccggca gagcaggaattagtcgtgtcccgtctacacatctgcgaggctctcaccaccatgtcaatccttgctcccaggggacacat ggtccttaaaaagttcactatgtttgagtgtgacacaatttgtctcatgtacatactaaactgtatgttctcagaggtcc acctaataaaaccagcaagcagtaagagtggtaactctgaggtttacatcgtatgtaaggagttccttgcccctgacgga cacaaactgctgatcgataggatgtgtgagatgtacttcgactcagattcaaacttgtctacaccattgaaatgtatgtt tgccatcgatcaaattcctgagtcattccttctccagcatatcaacatctgtacgttattcaccaatctacagggggaga caatccagaataacctcgaccattacccagtcctctcggacaagtaccgagcatggattgaaagtgtcaaggagtattgt gcagagttctattttaatctatacaatgtacggccagtacctgaccattgtcgagtggtaccgttccggacacagaaaaa gattaagaaattaaatggattcagtaaaagaggaagcaaatttagagataagaaaagaagaaatgggacatttaatgaca gacaaattgttgcacggttaccatggaaacagagaatacaacaaatggagaaattagagatttctctcatacaccctgta tggtttaagaataggttggagttagatgagaatgtccttgaccccaggggattgacgataggggcgtgtccagactgtat acgcagctccaagttctgtgataacatctgtatccatgagatgaacaatatctttaccaatactttcacagagagagaaa taacaatagagcagtatagccatggcctcaataaagctctcagctacgtaccacctaatacacactcagaaaaaccagac gttatgcttgtgatcaagagatttagtacggaaagcgataggaggaaaatccttcatctctgtccaggaatttctcagct gttttgttccgatcaaattatacctgtggatacccctacaagaactacgtatattacagacggattggttaatcctgcca gctgtgcttacccaggacaggaaatcatgtcacaaacatacttaactacaacaataaacaacaatctcaagatgttaggt gtgggtgataacttagtcatcttgatctcctcatgtctaaccagatttacagcaggagttatctaccttctaacagcctg cttctcacagataaccttcgtgccaatgtccccgggatggagccttcagcagttcttggtgtgtaatgactttactggct atcctgatgtcatctctgatcacctacactgtctgtctgtccgtctggagacgtctgtccaggatgcaaaaacacaactt ctggaaacagtaccttcttatgttctcttctcag |
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Protein
| Protein ID | pfu_aug2.0_2611.1_05601.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2611.1_05601.t1 MDRKRKSSNTTISNLDLLSRTKAEKLFQKKASYVKDKDIEWHLPNPQAVGSTGPVWTVTELQDLKLKLNNLKDKLSDKEI SEWHSHTQFMNFAGNIVQDVRQQIHPELCTQAWCKFYEIISTYELVDFDSSNFNTVHLCEAPGAFVTSLNHFLISNDYGG TWTWYANTLNPWYEGNSVGEMIDDDHFIRDTADYWYFGPDNTGNIMDLNNLKCLVEKCQEMGNIHLVTADGSIDCQDDPA EQELVVSRLHICEALTTMSILAPRGHMVLKKFTMFECDTICLMYILNCMFSEVHLIKPASSKSGNSEVYIVCKEFLAPDG HKLLIDRMCEMYFDSDSNLSTPLKCMFAIDQIPESFLLQHINICTLFTNLQGETIQNNLDHYPVLSDKYRAWIESVKEYC AEFYFNLYNVRPVPDHCRVVPFRTQKKIKKLNGFSKRGSKFRDKKRRNGTFNDRQIVARLPWKQRIQQMEKLEISLIHPV WFKNRLELDENVLDPRGLTIGACPDCIRSSKFCDNICIHEMNNIFTNTFTEREITIEQYSHGLNKALSYVPPNTHSEKPD VMLVIKRFSTESDRRKILHLCPGISQLFCSDQIIPVDTPTRTTYITDGLVNPASCAYPGQEIMSQTYLTTTINNNLKMLG VGDNLVILISSCLTRFTAGVIYLLTACFSQITFVPMSPGWSLQQFLVCNDFTGYPDVISDHLHCLSVRLETSVQDAKTQL LETVPSYVLFS |
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