Gene
| Gene Model ID | pfu_aug2.0_262.1_07252 |
|---|---|
| Locus | scaffold262.1 : 52856 ... 69465 : + |
| To GenomeBrowser | scaffold262.1:52856..69465 |
| Genes list of scaffold | scaffold262.1 |
| Synonym | pfu_aug1.0_7283.1_09522 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gelsolin-like protein 2-like isoform x1 | GO:0003779 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_262.1_07252.t1 | 3 | 1 | Gelsolin | 62 | 79 | 7.2e-21 | 73.6 | 0.0012 | 17.0 | 5.1 |
| pfu_aug2.0_262.1_07252.t1 | 3 | 2 | Gelsolin | 82 | 143 | 7.2e-21 | 73.6 | 3.2e-14 | 4.7e-10 | 39.0 |
| pfu_aug2.0_262.1_07252.t1 | 3 | 3 | Gelsolin | 161 | 225 | 7.2e-21 | 73.6 | 3.3e-10 | 4.8e-06 | 26.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_262.1_07252.t1 | gi|449678772|ref|XP_002164209.2| | 0.0 | |
| pfu_aug2.0_262.1_07252.t1 | gi|676468019|ref|XP_009058073.1| | hypothetical protein LOTGIDRAFT_105757, partial [Lottia gigantea] | 5.0e-37 |
| pfu_aug2.0_262.1_07252.t1 | gi|524887592|ref|XP_005100380.1| | PREDICTED: gelsolin-like protein 2-like isoform X1 [Aplysia californica] | 7.0e-36 |
| pfu_aug2.0_262.1_07252.t1 | gi|676472380|ref|XP_009059473.1| | hypothetical protein LOTGIDRAFT_192582 [Lottia gigantea] | 2.0e-35 |
| pfu_aug2.0_262.1_07252.t1 | gi|325197162|ref|NP_001191425.1| | gelsolin [Aplysia californica] | 3.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_262.1_07252.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_262.1_07252.t1 atggcaggtctaaggaaggcaaagaagtatgactggaaggactctaacatggcgttatttggctctgacactgagaggaa agtcaaaaaggagtcagccatgtgtgaacctgcatgggaaggtgctggacaggaagtaggactccaaatatggagaatag agaaattcattgtgaaggattggccgaaagaagactatggaaaattccatactggtgactcctacataatactgtattgt gccttcagtaagaaggcattggattctggtgatgtatttatacttgacaatggcctagagattgtacagtggaatggatc ctccagtaacggctttgagagaaacaaggctgcatcgtactgccaggctttggagtcagagagaggtcataacaacacaa aatgtgtggaagagggacaacatagtagatcacaaatctacgttcaaatgatctctgatgctgatggcagtattggtatg gatgaagttaagacaggaaccgtaaccatggctgacttaggatctgatgatgtgttccttgttgacactggtatgcatgt gtttgtgtatgtgggtgccaatgcctccatagaggagaggagaaatggacttccctatgcctgtaattacgtgaataccc aatgcaagaagccatggacaccctgcacagtggtaagagagggagacagcagtcagctggaaaatgagattcattaa |
|
Protein
| Protein ID | pfu_aug2.0_262.1_07252.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_262.1_07252.t1 MAGLRKAKKYDWKDSNMALFGSDTERKVKKESAMCEPAWEGAGQEVGLQIWRIEKFIVKDWPKEDYGKFHTGDSYIILYC AFSKKALDSGDVFILDNGLEIVQWNGSSSNGFERNKAASYCQALESERGHNNTKCVEEGQHSRSQIYVQMISDADGSIGM DEVKTGTVTMADLGSDDVFLVDTGMHVFVYVGANASIEERRNGLPYACNYVNTQCKKPWTPCTVVREGDSSQLENEIH |
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