Gene
| Gene Model ID | pfu_aug2.0_262.1_07253 |
|---|---|
| Locus | scaffold262.1 : 75737 ... 94205 : - |
| To GenomeBrowser | scaffold262.1:75737..94205 |
| Genes list of scaffold | scaffold262.1 |
| Synonym | pfu_aug1.0_11374.1_03064 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_262.1_07253.t1 | 1 | 1 | 7tm_1 | 42 | 333 | 2.8026e-45 | 154.6 | 0.0 | 4.2039e-45 | 153.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_262.1_07253.t1 | gi|260817780|ref|XP_002603763.1| | hypothetical protein BRAFLDRAFT_86591 [Branchiostoma floridae] | 9.0e-39 |
| pfu_aug2.0_262.1_07253.t1 | gi|676489470|ref|XP_009064945.1| | hypothetical protein LOTGIDRAFT_132263 [Lottia gigantea] | 1.0e-37 |
| pfu_aug2.0_262.1_07253.t1 | gi|260828201|ref|XP_002609052.1| | hypothetical protein BRAFLDRAFT_84868 [Branchiostoma floridae] | 3.0e-36 |
| pfu_aug2.0_262.1_07253.t1 | gi|115638594|ref|XP_797599.2| | 3.0e-34 | |
| pfu_aug2.0_262.1_07253.t1 | gi|585683625|ref|XP_006812445.1| | PREDICTED: protocadherin Fat 4-like [Saccoglossus kowalevskii] | 9.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_262.1_07253.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_262.1_07253.t1 atgaatagcagctcgtcgggacatggaagcacagaagatctacttgactccaaacatttacaagaggctgattatgcagc ttgtgttgccatgattgcaattaacggaacgacatttttcgcgaatgtgaccgtaatcatcggaattctcagtaacaaac gccttagaaacacaccaacaaactttcttctcataaatctgtgtgtcatagacttgattagtgcttcgaccatactgccc atttcgatacacactttcatttccaaagggtggccatggggtgaatctttgtgtcaaatcctcggtgtgctcgtatcctt ttgtattttttcatcaatattgagtatatgctcaatcagcatagagagattttattccatcaaactccctatgcaccacg cggcccattgctctgtcaccaaggtgcttcttgttatacttattgtttggattttctgtagtgctattgcgtcacttccg gtgctaggttggaacgaatacgaatatctgccttatcgagtacagtgtctgctttcgtgggaaacggaggagcgacatca aagctttatcatccttataagttgtgtttgcttcctgataccgggatttgtattatgcttcacgttccttggaatctaca aggtagcaaaattatctgcaactcaggttcacccaactatcggcaacattgctccttttgattcaaacgatagtatctca gagccgaccagacataccgttgtcgtcaatcctgtaaagacaggcaacttgacctgcaacaacaataacattaacaacaa caacaacctcgccgattctgtcggactacgatgtcagaataaaaggttcaaggcagctaaaaccttattagtgttgctca ttctttacatagttctttggggaccttattttacattacaaattatcggagtctcccagaacttgcactccactagctat atgatagcagaatcggttacattgtggataggtaaagtaccaatacgaattgactggaaatcagcccagatgacagacta tccaaaaaggaatggtagtgtagagcgtgtagaagtcaaaagacttcatgccggtaaaggccctgtcacaccaacacgtt ctggcatggcgttcgtactacgacctccaaaattgtacgaaacgtggcttgaacgtagtaaggacacgggcaacgtaacg atgtgttgtccatcaatactccaaaattcgcggattacctcagcagaagtcaaagaaactacagagacaaataattcagc atcctatttggacataatgttgtcctacgacactgatggtcacatgaacacctcactctattacaaacgtgacgacttca atctcagcatcacaaacttttcttttctgagtagcaacattccttcaccgcctgcttatggcgtgttcatatctcagttg atacgctatgcccgagctagtaccaaatatacagattttgttctgagagctaggcgtctttcagataagcttctcagtca gggatacgtttgtggtcgactaacatcgtcactgaggaagttctactgttattatggggaactcgtcatactctatgatg tcccactctcaagaatggtggatgatattctgtcatag |
|
Protein
| Protein ID | pfu_aug2.0_262.1_07253.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_262.1_07253.t1 MNSSSSGHGSTEDLLDSKHLQEADYAACVAMIAINGTTFFANVTVIIGILSNKRLRNTPTNFLLINLCVIDLISASTILP ISIHTFISKGWPWGESLCQILGVLVSFCIFSSILSICSISIERFYSIKLPMHHAAHCSVTKVLLVILIVWIFCSAIASLP VLGWNEYEYLPYRVQCLLSWETEERHQSFIILISCVCFLIPGFVLCFTFLGIYKVAKLSATQVHPTIGNIAPFDSNDSIS EPTRHTVVVNPVKTGNLTCNNNNINNNNNLADSVGLRCQNKRFKAAKTLLVLLILYIVLWGPYFTLQIIGVSQNLHSTSY MIAESVTLWIGKVPIRIDWKSAQMTDYPKRNGSVERVEVKRLHAGKGPVTPTRSGMAFVLRPPKLYETWLERSKDTGNVT MCCPSILQNSRITSAEVKETTETNNSASYLDIMLSYDTDGHMNTSLYYKRDDFNLSITNFSFLSSNIPSPPAYGVFISQL IRYARASTKYTDFVLRARRLSDKLLSQGYVCGRLTSSLRKFYCYYGELVILYDVPLSRMVDDILS |
|