Gene
| Gene Model ID | pfu_aug2.0_262.1_07254 |
|---|---|
| Locus | scaffold262.1 : 103636 ... 119867 : + |
| To GenomeBrowser | scaffold262.1:103636..119867 |
| Genes list of scaffold | scaffold262.1 |
| Synonym | pfu_aug1.0_2379.1_22968 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| epithelial chloride channel | GO:0006811 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_262.1_07254.t1 | 2 | 1 | CLCA_N | 8 | 131 | 2.50006e-41 | 141.6 | 8.4e-28 | 1.4e-24 | 86.7 |
| pfu_aug2.0_262.1_07254.t1 | 2 | 2 | CLCA_N | 130 | 237 | 2.50006e-41 | 141.6 | 5.2e-18 | 8.6e-15 | 54.6 |
| pfu_aug2.0_262.1_07254.t1 | 1 | 1 | VWA_CoxE | 286 | 409 | 1.9e-06 | 27.2 | 2.1e-09 | 3.4e-06 | 26.3 |
| pfu_aug2.0_262.1_07254.t1 | 1 | 1 | VWA_2 | 296 | 451 | 4.4e-16 | 59.4 | 4.9e-19 | 8.1e-16 | 58.5 |
| pfu_aug2.0_262.1_07254.t1 | 1 | 1 | VWA | 296 | 455 | 1.7e-12 | 47.3 | 2.2e-15 | 3.6e-12 | 46.3 |
| pfu_aug2.0_262.1_07254.t1 | 1 | 1 | DUF1973 | 483 | 650 | 3.0e-23 | 82.1 | 3.5e-26 | 5.8e-23 | 81.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_262.1_07254.t1 | gi|291223817|ref|XP_002731904.1| | PREDICTED: epithelial chloride channel protein-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_262.1_07254.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_262.1_07254.t1 atgaagatagtcagtactctggaaagcattttcctgttcttaattttgcctgttactggcagacttcccaaaaaggttat caagatagacaacaacggataccaggatgtcacaataaccatctctcaaaaccttcctcaacaggataatgaaaatttag tacaaaacattacggatctattcacggcaacatcagagcagctttttatagcaacaaagaatcatctgtacttcaaacat ataactatagtagttcctcgtacatggactagtaaaccagactaccagatcgtgagtggtcctcagttcgatatggcaca tgtaattataggtgagaggaatccaagagttgggagtcgaccatatgttaccggggtaacgagctgtgataaattccttg tccatcagtggggtcattatcgttggggattatttgatgagtatcctggaacggaatctccaaccttgaaaccagagaaa atattttatcttgctaatggaacagcaaaaccaaacgtatgttcggatcaagtgaaaggaagatttttaactgactgtaa agatccgaattctagatgtaacatacaggatggtatgccagaatcagcatgtcagttttgtatggatgatgattcgtcag cacgccagtcattgatgggatattactatcacgactcaatttcccagttttgtgacgatagtcctgagaatggttcaact gagatacataatgtgtacgctgatacgaagcagaacagatactgtcagggcaggagtaactgggctgtcattagggaaca taacgacttcaaaggtttgaaagcagcatcatctatcaccaacactagacctacatttactatagtacaacaaggaccac acagaattgttctgatcctagacatttcaggaagcatgagggatgaagggaaactagagcgactactgcaagcgacaact catttcctgttgaatgtggttgatgataacacagaggtagggctagttacctttaatagaagggcaagaatcgtgaggtc aatgacaaggatgagctctcagcaagtacgtgaagattttgtagcaggtctaccttccgaagctaaaggtgatacatcta taggtgccggaatattgaagggaatcgagtgtctaaaagcttctggaggtgtgacagttggaagttttctgtttattgtt tctgacggcgaggaaagagcagccccttttataaattcaagtactaaggaagttacaaaagccgaagttattgtgatgtc cttggcctttacgaattcttctgacgtacaattggtcaatttatcaggcataactggtggccgaagtttccttgaatcaa acaaggacaattcaactgttttagtgaatgcactctatcaaactacggggtacacgaatgatgacaacaatagcattata ctgattgaaagccagcgaaccgttcctgtgaacggacaaatcagaggacgtttttatattgacgacacaatcggtagaga tactctgttggctgtcatcggttcaaacttgcccgctctaaccatcaatgtatccagtcctaatggatcaacctaccagc tcagctcctgcaaactcagggtttgttctctcagattcccagggatcttagagattggcgaatacatgttcatgatactc actcgatttggcggctcctatgtttacaccatacaatcccgccaaagatcacagagttcaaaggtcataactgctaaagc ctggatgtctggaccaagtctaaatctgagtactacgtcatcactaaaggtgtttacttcagttatgtgtggatttgatc cagtgctgaatgccacagtcagagctttcattgattccagtaaaagtccagttgttctagtagatacaggctcaggagct gacttacaagccggtgacggtatttactcggcctatatactaccaagtcatgtgacaggaagtggccgtttcaatggccg ggtcttagttgaaaacgaaaataggacagccaaattaatcgttcctgtcagacggagaaaacgtgacataggctttctag atgtaccaaagttgacaacagtgaacacagagcggttttcccgtgtaacagagacttcagaattcgaagtccttaacttt ggcagcagcagtgtgaaggatatcataccacctgctagaataactacattagaactagtagacgctgatcattataatcg taaattcatccttcagttcatggctgtgggcgacgaccttgactcaggcatcgcatcctcttatgatgtgagaatgtcag cgtcggtacaggaactaatggtaacaccatggaatgcaccaacagtgatgaatgaggatataccaactccagaggaagcc ggaactttacaaactatgagattatccgttcagaactcttctcttacctactttgtcagaatacgagctgttgactcgaa caataatacaggcgaaatgtctaatattgtatcactttcagttatacacttacagtccctgaaaataacaagtacaacta tgaaagtgacaaccaatacattttctgctgcttcgtcatgttcagggaaacgtttaactcctatgcttatcatatttgta cttttgtatgaaagactcggctttgatcaatatagcattttgtatagatag |
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Protein
| Protein ID | pfu_aug2.0_262.1_07254.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_262.1_07254.t1 MKIVSTLESIFLFLILPVTGRLPKKVIKIDNNGYQDVTITISQNLPQQDNENLVQNITDLFTATSEQLFIATKNHLYFKH ITIVVPRTWTSKPDYQIVSGPQFDMAHVIIGERNPRVGSRPYVTGVTSCDKFLVHQWGHYRWGLFDEYPGTESPTLKPEK IFYLANGTAKPNVCSDQVKGRFLTDCKDPNSRCNIQDGMPESACQFCMDDDSSARQSLMGYYYHDSISQFCDDSPENGST EIHNVYADTKQNRYCQGRSNWAVIREHNDFKGLKAASSITNTRPTFTIVQQGPHRIVLILDISGSMRDEGKLERLLQATT HFLLNVVDDNTEVGLVTFNRRARIVRSMTRMSSQQVREDFVAGLPSEAKGDTSIGAGILKGIECLKASGGVTVGSFLFIV SDGEERAAPFINSSTKEVTKAEVIVMSLAFTNSSDVQLVNLSGITGGRSFLESNKDNSTVLVNALYQTTGYTNDDNNSII LIESQRTVPVNGQIRGRFYIDDTIGRDTLLAVIGSNLPALTINVSSPNGSTYQLSSCKLRVCSLRFPGILEIGEYMFMIL TRFGGSYVYTIQSRQRSQSSKVITAKAWMSGPSLNLSTTSSLKVFTSVMCGFDPVLNATVRAFIDSSKSPVVLVDTGSGA DLQAGDGIYSAYILPSHVTGSGRFNGRVLVENENRTAKLIVPVRRRKRDIGFLDVPKLTTVNTERFSRVTETSEFEVLNF GSSSVKDIIPPARITTLELVDADHYNRKFILQFMAVGDDLDSGIASSYDVRMSASVQELMVTPWNAPTVMNEDIPTPEEA GTLQTMRLSVQNSSLTYFVRIRAVDSNNNTGEMSNIVSLSVIHLQSLKITSTTMKVTTNTFSAASSCSGKRLTPMLIIFV LLYERLGFDQYSILYR |
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