Gene
| Gene Model ID | pfu_aug2.0_262.1_07262 |
|---|---|
| Locus | scaffold262.1 : 223123 ... 256919 : + |
| To GenomeBrowser | scaffold262.1:223123..256919 |
| Genes list of scaffold | scaffold262.1 |
| Synonym | pfu_aug1.0_6272.1_59984 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_262.1_07262.t1 | 5 | 1 | PKD | 162 | 191 | 4.4e-14 | 51.9 | 0.00042 | 1.3 | 8.8 |
| pfu_aug2.0_262.1_07262.t1 | 5 | 2 | PKD | 373 | 393 | 4.4e-14 | 51.9 | 0.004 | 12.0 | 5.7 |
| pfu_aug2.0_262.1_07262.t1 | 5 | 3 | PKD | 623 | 684 | 4.4e-14 | 51.9 | 0.00023 | 0.69 | 9.7 |
| pfu_aug2.0_262.1_07262.t1 | 5 | 4 | PKD | 732 | 787 | 4.4e-14 | 51.9 | 0.0086 | 25.0 | 4.6 |
| pfu_aug2.0_262.1_07262.t1 | 5 | 5 | PKD | 856 | 896 | 4.4e-14 | 51.9 | 8.0e-09 | 2.4e-05 | 23.9 |
| pfu_aug2.0_262.1_07262.t1 | 3 | 1 | REJ | 914 | 938 | 1.7e-25 | 89.2 | 0.038 | 110.0 | 0.8 |
| pfu_aug2.0_262.1_07262.t1 | 3 | 2 | REJ | 1218 | 1482 | 1.7e-25 | 89.2 | 5.7e-29 | 1.7e-25 | 89.2 |
| pfu_aug2.0_262.1_07262.t1 | 3 | 3 | REJ | 1527 | 1564 | 1.7e-25 | 89.2 | 0.66 | 1900.0 | -3.3 |
| pfu_aug2.0_262.1_07262.t1 | 3 | 1 | PLAT | 1768 | 1784 | 8.8e-18 | 64.7 | 4.9 | 15000.0 | -3.7 |
| pfu_aug2.0_262.1_07262.t1 | 1 | 1 | GPS | 1885 | 1919 | 1.8e-06 | 27.9 | 1.6e-09 | 4.9e-06 | 26.5 |
| pfu_aug2.0_262.1_07262.t1 | 3 | 2 | PLAT | 1997 | 2113 | 8.8e-18 | 64.7 | 3.4e-19 | 1.0e-15 | 58.1 |
| pfu_aug2.0_262.1_07262.t1 | 3 | 3 | PLAT | 2193 | 2224 | 8.8e-18 | 64.7 | 0.04 | 120.0 | 3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_262.1_07262.t1 | gi|260817170|ref|XP_002603460.1| | hypothetical protein BRAFLDRAFT_222761 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_262.1_07262.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_262.1_07262.t1 atggatatcccagtccactgtgggagaaatcccagtccacagtgggagaacaccctgtctgctcttcgacggtctcagac catgttcctcgactttgagattgcagcatacaacgattccagattgtttatggcaaacagaaatgcatctgaatttgaca tcgacaacaaacaggataatccgatcgttttgtcaagtgaagataaagtaacggttctccttgtattttcaaccggagat gtggacctaaatctaacagcggagctcgacaatggtattcacttaaacacatcgaaagctgttatagaccatgaaactgg aaacatttcatacactataaatgcatcctacatgaaagaggttgaatttgggagctacaatttgaccttttctctagaaa attcgtccactgttgtcggaacaaaaattgtcccgttcatttatgaggaaccgatcgctggattagacgaccttggatat tacaagtctccccgaaacgtatctctaagtacacaatttacagtaccgggacaacataatctaacagtagttgcgacaaa ttatgtatcatggatagacatttcagtcaatgtaaatgcttatgatagacaaaatgtatcgacagaaaatagcacagatg tcacaaggtttgataccatacctcctggcatgaatgtcgtgaacatgttacccggggagaacatgccattccgtttcgag tacaatgttggaggtcctatggtaaacttctcggcggccattagtaatggaacattacttgatacttcttcatctaagct gaatatatcaacaaaagaggttttctttacgttagagcattcttccatgatcagtgagggatacggaacatataccctag aatttctgttaacaccatcagaaggcaatgtgatgacaaaatttattacactacactacgaggaaccacttgcaggttta gatatcataaatgaaccatatgctccaatcgatgcagaacaacaattcaatattaccttctccagaggatcaaatgtgaa gatagtatgcttagttgacaatacaactcacgacctcggatttcacacgtctccgcgaaactatcctctaggtgtcatct ttacaacatcaggacaccataatgtaactgtaattgcagagaacactgtgtcaagggcggaaaattctgtccatgtcact gcgtattatagactaaatggattcagtgttatagtagaaaacacgacagtttcaactaccgacgatgctgttttcataat atgtctgtctaatgtctctcagttcccgatgggaagcatatccgcaaaagtagtctttggagacggcaatctttcgacag tagatatcaatgaaaatattgctcagatgcaaacaatttcttgctaccgcttttctcatcagtattcgattataggcaat tacacggctattatttctatcagatctaaagtagacgcgataacattaggcacatttgaaatggaaatttttgaaaaagg tgtcacaatgttcgatactataccggctgatatgaacgttttttacatgttgcctggggagaatgtgtctttccatttcg aatacgaaactggagggaactttattaacccggtgaacttctcggcggcaattagtaatggaacattacttgatacgtct tcatctaagctgaatacatcaacaaaagagatatttttcacgttagaacacacctccatgatcagtaactacactgcaga aatacttatcagttctgagattgacaaaaaatcgtatgctttcgacatttttgtatgggataacctggcagtgatacttg aagctaaacttgttggcaaagtttttgaaagctttaatttcaccttttcaaatcctccaccatcaggattcgcttacaat attgattatggcgacggaaattcacattcggagaatgaaagtgtttggtactatgcatatgaagacgctcctcttataca ctcatataatgatgatggcgtctaccacgttagtgtttatgcctggaatcaaatcttctcttctttcagtaattttgtaa taacaatccaataccccataccacaagaaaacatcacgctatctcctgcattttacgtgattcctatacctgatggtata atgaacttccacatgaatctgactgaagataatcctcaaccatcaaatgtcacgtgtttgtttgatttccaagatggcga tgaaattgacagggatgtcggacttatttttggttctccagtaaacaaaacatttgtctacgattttccgggtgaaaagg ctgtaaactttacatgttggaacagagtaagctctctgactaaaatgtcaaatataacagtcgtgaactttacattagat cattttgaaataatatatcagtctccggtgaatatgaacacaactctttcaaatgtagtagacctcaattacccaagaga cacgcctgttagaaaggtacaacacagtattgtagatgtatatttctatgtggacctgttacgctgtcataagttaccgc cggatatttattttcaatgggattttggagatggtagcgtagaaacggatttggtacaattcaagaaaattcacacttac acaaaaagaggacactatgaaatcaaagtaacaatattcaacaataaaacaaatgaacacttggaaattgatccctttat aattacaatgggaatcatccagttctcggtggaacctgccgatgggattgtttctttgactgaatttacttttcagtttg aaggatttgaaggaaatacaacttacattttcgtcccacaacaagtattctctaatacttcatttactctcgatgatcac atttttcagtatatatatccgcactggggtcagtttcaacctttcgtgttcgcagataatgggacagttaacgaaattgt ttatatggaaacgccagtggaagtcgacttcaacttgacggccctagatataagtgtcaataatggttcagttgatactt atagtattcatctaccaccaggttatttgaaagtaaccatctcagtgtcgaaatatactagaatgccttacacaacatgt gatattaacataggagatatcataaatgatgggaatttctctttgtttggaaatattacgtatcaagaaccgttgatttt ggaggaatattactacaccttaggtaatcacacattgatagtaaattgtacaaattatgcttccagcctttattttgagc aaaccatatatgtgtataacgaatgtttcaccgttgatggaatatttgacagacaatactcccattcgaacactcctatg aagacgtttagtttcatgaataccgatttgtcaactagaatgggagtgatttgtacagatatgcattcagagttcacatg gtcagtagagcaggtaattgtgaacaatagtaaagaacagaggattccgctagattataagcctgcaaagaatagaggaa tcgctagattcaacaatactatggatttgcatcagaagtacagcgtcctatataatctttctgaggaatgtacattagac gacgaagaaaggggtaaaaagctcttgaatttatccatcggctcatatacccagacatacattattcgtgtaatggttat tgacagtgaattgaattcaactttcacgcagctaattcaagtacaacttgacgatcctccgtcaataactgtcagatgca aaatcaactgcaaagaaaaggtggcattaggatctcctattgtcatgatagctgattgtaatgactgtctgatggatgag aagatatactatcagtggtcactatggaaacacaatggtgatgttagtactcaggtgtctgacttagaaataaacacaag aggaacgatgaatcagtctatatacatttacgagaactacatacaggcgggtgatacgtacgtgctcaaggttgaggtat catccagtttagtagcgagaaacggttccactgtgatagcaatagagcttattgccaactatcccccttatggagggtca tgtgaaatcaacaaattggtttactacgttccaactgatacggtcaacatcgaatgcaaaggctttgcggacgaaggact gcgaacatttccaaattacactttggatatcggtgagaaagaacccctgacgtacctctatgagacaaagaccaggaaga tagacttcattaccaagatggaagaagatattataacagaatcatacaaaggaggagaaagttccgtcattaatttgcct cttcaaataggagatgaagcttttaactacagcgttgacatgagggtattggtctcggatcgctttggagacattcatgt ttttacattcaatatcactgtcatgccagaccagagaatgctacccaaactggaagaggatgtcaacaatgcagaattct cgattcgggagtataaggatttattggatatcataaatgccggagggaatgatttagcagttgtcagacgatcgggctct ctagcctctataattgcttctgtcactgataacaacatgggacaaatcatggagactatggctaccgcggtactgacaga aaatgacgaagcaaagcaaataagtgtctctgatacacagcaggtgtccaaaaacctggaagaggtattcaggaacccaa gtcacgtgtcgggcaaatcaacggctgaaaattctgtttttaaactacttgatacaattacgtcagcttatgacgtcaaa cttttgctgacagaggtaggagcgggtccctctaagataacacgagaaaacatagagctcagcgtagaaaaggtcactgc agacatacttaaaaataggacggaaacagcaatacgggggatattgataggattcgaacagaatgatacagattcaataa atggaacactagaaataaagcaaactgtattcaacaagccacctacaatatacggtgaggacgctgcctccatcacgtca cgagtcatacaattagatctcggcaacaacagcttggcccctcgtgtttcctttacaaatcctcattacgcctcggcaag acgcgtggtaccgatatttagtccccaagatccagagcagatgttctatctgtcattcgaggtcgtgaatgacggagatg tctccctcatttacattcaacctgaaaattttgacatattccataaagacaacctgaccctgtacgacttgtaccttggt gaaggtgatctacctaagtcaacctcgaacagtttcaagcataccttcaaggtgcaagattgggattcagacaatggatt caaggtgatgttaccacagatggataaaggaaagaaatacataggaataaagccatacgaagtaccaaaatttctgcctc ccaagaagagacgtaagaaacgatctttggttgatgatgatgtcgttgggcgaaattcctctctgattataagcaatatt atgtgtcctttggataactcatctcatcagaataatactgaatgtattgatcccgtcgtaagcataacagatactagtgt caacatttcctttgaaccaatgaaagccaacttttcagtaataatagtcactaccggatgtcgatcttggaacgaggctg aaaagaaatggacaacagaaggctgcatggttttgcccatgtcaacaatgaatgagactgtttgtcgttgtcctcgatca tcgggtaacatatttgctaccacattttacgtacctccgaaccagatagacttccgtactgtattcagcaagtttgatgc aatgaatgccgctatatatggtacctgtataggaatcctggtggtgtgggtagttgccggtatttttctaaggatacagg acaaaaatgatcaagataaatggcgtacccgcttcctatgcgatactgattccagcgacgactatttctatatgataacc gtgtatacatgtatatggaggaagtctggtactaaatcccaggtgtactttgtcctctcaggcgacaaagacgacagtgg ggtcagaatcatgagtgatggtcaagaaatgggtttcccatcggggagtgttcgatccttcttcatggggacaaaatttg atcttggcgacctaatgatgataagaatatggcatgacaatagtgggacaggaaatgaacaatcatggtacttgaataaa atcatcgtagacgatctgcaaaaacacaaaagattcagatttatatgcacgcagtggttggcgcttaaagagggcgatgg agaggtagaacgaattctgccagtgtacaatgaagaggagaaccagaaattcaacactctcttctttcaacaagcagagg tcaacatcacagagaatcatctttggttatctacggttttccgtccacagaaaagtaacttcacaagagtacaaagactt tcctgcatcatagcactcctgttcttgactatgatttcaaacgccatgttcttccgctcacctgatgcgaaagtagttcc agaccaacacttttccggngtagacgatctgcaaaaacacaaaagattcagatttatatgcacgcagtggttggcgctga atgagggcgatggagaggtagaacgaattctgccagtgtacaatgaagaggagaaccagaaattcaacactctcttcttt caacaagcagaggtcaacatcacagagaatcatctttggttatctacggttttccgtccacagaaaagtaacttcacaag agtacaaagactttcctgcatcatagcactcctgttcttgactatgatttcaaacgccatgttcttccgctcacctgatg cgaaagtagttccagaccaagtaagaattggaatgttacggttctcaacgtcaaccgtcttcgtctccgtaatcggaatc ttaatcagcacttttccagtgttgttggtgaccctcattttcaggaacacccgtacaaaacatgttgataaaagaataca tgacaaagaaaatgtttgcaaaatcttatccaataatgtcaccgttcttgggaatatagaggacgttaacacattcaagt atttgcccttaccatacgtgatgaaatatgtgtcttggtcgattatattttgttccgttgtcgcatcaacattcttcctg atcttgtacagcatgcagtggggtaaagctaaatctgaagaatgggttgtctctgttttcttttcatttacggaatcaat cattataatggatccactcaaggtagtaatcatcgccttcgtcttcgccatcatatgtaaaagtcagagtgaggaccgat gtccagatgtaaatgtaaattggttaaaaacactagcacaaggcttcgagagtcaatccaaacgggctttcattactctt tgggacaacgtcaatcaagataacgaaatcgctaagaaggagaaagtagaaatactgagaaaaataaggaaagaagaggt taaagctaaaaaggccatggccagattgttcatatacctgggttatatgcttgttctttacagcataagttatgttaata gggaccaaagagccttcttattgaaaaaccatgttgataagcaactcaacaccaatagcaagtcccaaactggattttca tctaacaaggcaggtgaggacgcttcacagtctgaagtaggtgatagtgatatgtacattgataaccaaaccaaaccatc actagaacaaccagaagagcccgtctcaatcaaagatgacgacatccagttctgtgttaaggataacgagtacaagaaaa aacagagacaagtcctgtttttctaa |
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Protein
| Protein ID | pfu_aug2.0_262.1_07262.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_262.1_07262.t1 MDIPVHCGRNPSPQWENTLSALRRSQTMFLDFEIAAYNDSRLFMANRNASEFDIDNKQDNPIVLSSEDKVTVLLVFSTGD VDLNLTAELDNGIHLNTSKAVIDHETGNISYTINASYMKEVEFGSYNLTFSLENSSTVVGTKIVPFIYEEPIAGLDDLGY YKSPRNVSLSTQFTVPGQHNLTVVATNYVSWIDISVNVNAYDRQNVSTENSTDVTRFDTIPPGMNVVNMLPGENMPFRFE YNVGGPMVNFSAAISNGTLLDTSSSKLNISTKEVFFTLEHSSMISEGYGTYTLEFLLTPSEGNVMTKFITLHYEEPLAGL DIINEPYAPIDAEQQFNITFSRGSNVKIVCLVDNTTHDLGFHTSPRNYPLGVIFTTSGHHNVTVIAENTVSRAENSVHVT AYYRLNGFSVIVENTTVSTTDDAVFIICLSNVSQFPMGSISAKVVFGDGNLSTVDINENIAQMQTISCYRFSHQYSIIGN YTAIISIRSKVDAITLGTFEMEIFEKGVTMFDTIPADMNVFYMLPGENVSFHFEYETGGNFINPVNFSAAISNGTLLDTS SSKLNTSTKEIFFTLEHTSMISNYTAEILISSEIDKKSYAFDIFVWDNLAVILEAKLVGKVFESFNFTFSNPPPSGFAYN IDYGDGNSHSENESVWYYAYEDAPLIHSYNDDGVYHVSVYAWNQIFSSFSNFVITIQYPIPQENITLSPAFYVIPIPDGI MNFHMNLTEDNPQPSNVTCLFDFQDGDEIDRDVGLIFGSPVNKTFVYDFPGEKAVNFTCWNRVSSLTKMSNITVVNFTLD HFEIIYQSPVNMNTTLSNVVDLNYPRDTPVRKVQHSIVDVYFYVDLLRCHKLPPDIYFQWDFGDGSVETDLVQFKKIHTY TKRGHYEIKVTIFNNKTNEHLEIDPFIITMGIIQFSVEPADGIVSLTEFTFQFEGFEGNTTYIFVPQQVFSNTSFTLDDH IFQYIYPHWGQFQPFVFADNGTVNEIVYMETPVEVDFNLTALDISVNNGSVDTYSIHLPPGYLKVTISVSKYTRMPYTTC DINIGDIINDGNFSLFGNITYQEPLILEEYYYTLGNHTLIVNCTNYASSLYFEQTIYVYNECFTVDGIFDRQYSHSNTPM KTFSFMNTDLSTRMGVICTDMHSEFTWSVEQVIVNNSKEQRIPLDYKPAKNRGIARFNNTMDLHQKYSVLYNLSEECTLD DEERGKKLLNLSIGSYTQTYIIRVMVIDSELNSTFTQLIQVQLDDPPSITVRCKINCKEKVALGSPIVMIADCNDCLMDE KIYYQWSLWKHNGDVSTQVSDLEINTRGTMNQSIYIYENYIQAGDTYVLKVEVSSSLVARNGSTVIAIELIANYPPYGGS CEINKLVYYVPTDTVNIECKGFADEGLRTFPNYTLDIGEKEPLTYLYETKTRKIDFITKMEEDIITESYKGGESSVINLP LQIGDEAFNYSVDMRVLVSDRFGDIHVFTFNITVMPDQRMLPKLEEDVNNAEFSIREYKDLLDIINAGGNDLAVVRRSGS LASIIASVTDNNMGQIMETMATAVLTENDEAKQISVSDTQQVSKNLEEVFRNPSHVSGKSTAENSVFKLLDTITSAYDVK LLLTEVGAGPSKITRENIELSVEKVTADILKNRTETAIRGILIGFEQNDTDSINGTLEIKQTVFNKPPTIYGEDAASITS RVIQLDLGNNSLAPRVSFTNPHYASARRVVPIFSPQDPEQMFYLSFEVVNDGDVSLIYIQPENFDIFHKDNLTLYDLYLG EGDLPKSTSNSFKHTFKVQDWDSDNGFKVMLPQMDKGKKYIGIKPYEVPKFLPPKKRRKKRSLVDDDVVGRNSSLIISNI MCPLDNSSHQNNTECIDPVVSITDTSVNISFEPMKANFSVIIVTTGCRSWNEAEKKWTTEGCMVLPMSTMNETVCRCPRS SGNIFATTFYVPPNQIDFRTVFSKFDAMNAAIYGTCIGILVVWVVAGIFLRIQDKNDQDKWRTRFLCDTDSSDDYFYMIT VYTCIWRKSGTKSQVYFVLSGDKDDSGVRIMSDGQEMGFPSGSVRSFFMGTKFDLGDLMMIRIWHDNSGTGNEQSWYLNK IIVDDLQKHKRFRFICTQWLALKEGDGEVERILPVYNEEENQKFNTLFFQQAEVNITENHLWLSTVFRPQKSNFTRVQRL SCIIALLFLTMISNAMFFRSPDAKVVPDQHFSXVDDLQKHKRFRFICTQWLALNEGDGEVERILPVYNEEENQKFNTLFF QQAEVNITENHLWLSTVFRPQKSNFTRVQRLSCIIALLFLTMISNAMFFRSPDAKVVPDQVRIGMLRFSTSTVFVSVIGI LISTFPVLLVTLIFRNTRTKHVDKRIHDKENVCKILSNNVTVLGNIEDVNTFKYLPLPYVMKYVSWSIIFCSVVASTFFL ILYSMQWGKAKSEEWVVSVFFSFTESIIIMDPLKVVIIAFVFAIICKSQSEDRCPDVNVNWLKTLAQGFESQSKRAFITL WDNVNQDNEIAKKEKVEILRKIRKEEVKAKKAMARLFIYLGYMLVLYSISYVNRDQRAFLLKNHVDKQLNTNSKSQTGFS SNKAGEDASQSEVGDSDMYIDNQTKPSLEQPEEPVSIKDDDIQFCVKDNEYKKKQRQVLFF |
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