Gene
| Gene Model ID | pfu_aug2.0_262.1_07264 |
|---|---|
| Locus | scaffold262.1 : 277473 ... 290523 : + |
| To GenomeBrowser | scaffold262.1:277473..290523 |
| Genes list of scaffold | scaffold262.1 |
| Synonym | pfu_aug1.0_29745.1_19320 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| er degradation-enhancing alpha-mannosidase-like protein 1-like | GO:0004571 GO:0005509 GO:0008152 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_262.1_07264.t1 | 1 | 1 | Glyco_hydro_47 | 52 | 501 | 0.0 | 448.3 | 0.0 | 0.0 | 448.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_262.1_07264.t1 | gi|676467488|ref|XP_009057904.1| | hypothetical protein LOTGIDRAFT_105585 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_262.1_07264.t1 | gi|524864964|ref|XP_005089315.1| | PREDICTED: ER degradation-enhancing alpha-mannosidase-like protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_262.1_07264.t1 | gi|260809978|ref|XP_002599781.1| | hypothetical protein BRAFLDRAFT_276750 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_262.1_07264.t1 | gi|736247805|ref|XP_010787046.1| | PREDICTED: ER degradation-enhancing alpha-mannosidase-like protein 1 isoform X1 [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_262.1_07264.t1 | gi|632970342|ref|XP_007901596.1| | PREDICTED: ER degradation-enhancing alpha-mannosidase-like protein 1 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_262.1_07264.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_262.1_07264.t1 atgaaagttttccggattatacttgttttgacaaactttttaaatataaccccacgacttcactggctccgcggtgaaac aaacccttatgaagacaaatatgggtacttcagcgaaagggaaagactggaaagtttggataaagtcaggaatatgtttt actttggttatgacaattacatgaagtatgcttttccagaggatgaattaaatccaatttactgtaaaggcagaggtcat gaccatactaatccatctaatattaacatcaatgatgtcctaggagattacatgttgaccctggtggacacattggatac tctggtgataatgggaaatgcgaccgagttcaaaaaagctgttcatttagtgatagataatttggatttcaacaagccag tgactgtgcaagtttttgaagctaccataagagttgttggatctttgctatcagcacatctgataatcactgacccccgt cagccgtttggagatatgataccagaaggttatgacaatgagctgttatcattagctaacgatctagctgctagattatt accagcttttgaaaacactgcaactggtattcctttccctagagtaaatctaagtcatggagtgccacttaactgtataa acgagacgtgtacatcaggtgctggcaccttggttttagagtttgggctgttgtcacgattacttggagatcctatttat gaggcctatgccaggcgtgctgtcaaaagactgtgggaatatagatccaacattacaggtttacttggtaatgtgatcaa tatccagacgggggagtggacaggacagatgagcggattaggtgccggactggactcgttttacgagtacctgctcaagg cttttattttatttggagaagaagaagatctaaaaatgtttaaagagtcatacgaaacaataaaattccatatgaaaaga gggagattaaaatgtaacaaaggtgaaggacatgctccattgtatgtaaatgtacatatgcgtacgggtgatactataaa taactgggtggattccctacaggcagcatggccaggggtacaggtattgaatggtgatatagatgaagcaatatgtaccc atgccttattctactctatatggaggaaatacagcatgttgccggagcgttataattggtatttaagagcgccagacgtc tcgttttatccactcagaccagagctggttgaatctacatattttctttacagagccacaaaaaatcccttctatttaca cgttggcaaggatattcttcacagcttactgaattataccaaggctgaatgtggatttggcactgtccatgatgttatag acaagtcattagaggaccgtatggagagcttcttcctcagtgaaacctgtaaatatctctaccttctatttgacaaggac aatcacgttaacacagatttgtcgggttatatatttaacacggagggacatctaattcccgtcagtaagaggttcaggca taaaccgtgggaagaagaatccgagagacaaacggaagtcacagaatcagcggataagaaagttataagtgttgtcaatg ttcagtccaattcatctctatcacatgtacattgccaaagtattcctcaggagcagcggtacttccttccattaaggaca gattatttcgagcagatgcagaatgccgtaggagtgtttgatatgatctga |
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Protein
| Protein ID | pfu_aug2.0_262.1_07264.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_262.1_07264.t1 MKVFRIILVLTNFLNITPRLHWLRGETNPYEDKYGYFSERERLESLDKVRNMFYFGYDNYMKYAFPEDELNPIYCKGRGH DHTNPSNININDVLGDYMLTLVDTLDTLVIMGNATEFKKAVHLVIDNLDFNKPVTVQVFEATIRVVGSLLSAHLIITDPR QPFGDMIPEGYDNELLSLANDLAARLLPAFENTATGIPFPRVNLSHGVPLNCINETCTSGAGTLVLEFGLLSRLLGDPIY EAYARRAVKRLWEYRSNITGLLGNVINIQTGEWTGQMSGLGAGLDSFYEYLLKAFILFGEEEDLKMFKESYETIKFHMKR GRLKCNKGEGHAPLYVNVHMRTGDTINNWVDSLQAAWPGVQVLNGDIDEAICTHALFYSIWRKYSMLPERYNWYLRAPDV SFYPLRPELVESTYFLYRATKNPFYLHVGKDILHSLLNYTKAECGFGTVHDVIDKSLEDRMESFFLSETCKYLYLLFDKD NHVNTDLSGYIFNTEGHLIPVSKRFRHKPWEEESERQTEVTESADKKVISVVNVQSNSSLSHVHCQSIPQEQRYFLPLRT DYFEQMQNAVGVFDMI |
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