Gene
| Gene Model ID | pfu_aug2.0_262.1_07266 |
|---|---|
| Locus | scaffold262.1 : 328622 ... 334806 : - |
| To GenomeBrowser | scaffold262.1:328622..334806 |
| Genes list of scaffold | scaffold262.1 |
| Synonym | pfu_aug1.0_9732.1_60657 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_262.1_07266.t1 | 1 | 1 | FYVE | 90 | 186 | 9.1e-20 | 70.3 | 5.0e-23 | 1.8e-19 | 69.3 |
| pfu_aug2.0_262.1_07266.t1 | 1 | 1 | Rbsn | 335 | 375 | 1.5e-17 | 62.8 | 7.9e-21 | 2.9e-17 | 61.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_262.1_07266.t1 | gi|676470323|ref|XP_009058814.1| | hypothetical protein LOTGIDRAFT_217928 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_262.1_07266.t1 | gi|524874865|ref|XP_005094166.1| | PREDICTED: rabenosyn-5-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_262.1_07266.t1 | gi|542163112|ref|XP_005490208.1| | PREDICTED: rabenosyn-5 [Zonotrichia albicollis] | 0.0 |
| pfu_aug2.0_262.1_07266.t1 | gi|726996504|ref|XP_010388603.1| | PREDICTED: rabenosyn-5 [Corvus cornix cornix] | 0.0 |
| pfu_aug2.0_262.1_07266.t1 | gi|669280467|ref|XP_008632687.1| | PREDICTED: rabenosyn-5 [Corvus brachyrhynchos] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_262.1_07266.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_262.1_07266.t1 atgtttgacacgagcagttctagcatgtcatcctctacatatgcggtatctaatctatctgttactggctatgatccatc tgtttgggacccacaggaaatcggttttgtgcggagtagaacagacatgtttaaatcacagcgtggagctcgagtggatc gttatgtggtggagaccaacaagctgattatacgactggacaaactaacgtcgtcagacgcccctgtggagagtagtaaa agaagagcgtttgagaagtcagtggtgcagtgggcaccagatagctctgtgaagacctgccagttctgtaaacgtaactt tacattaacacgcagacgacatcattgtcgtttatgtggagacatcatgtgtgataagtgctcacagtttctaccacata catttgccaagaagctgactgatccagccttccagctacaaagtgacgtagacgtaggatttctgaagcgttccgatagt aatgctagtctgaactcgatccttggccctgagggagatccccatatcaggacatgtgctaactgccgtaaactgctgga acgtagaaacgatcaaatggaacaaaggaattataaaccagccattgtactactgtatgagaaaatgaagatgtgtgtag ataacactgaggacttactcagagaatacttgcctatggtggaatcactcagtgctggagagtcaatacatagtttacag aaagctcagatgtacagagtcaaaataaccaaactgtatgaaaccatagatggcttaagacgtacacaggaaatacagca gaggattgcagcggaaagactggcagccatcgaggcccaggaaagggaaaaaaggctgcaagaagccaaagaagggggac ataaatatacaccaagtagtgtgaaggtcacagaggaaagaccaaggtcagggtcaaagaaacttacaagctggatgccg agtgagtcaaacattaacttcagtgacagagacgatcccatgatacaacagatgaacataatacgtggttatattaaaca ggctcggcaagcacagaagtttgatgaggttaacatgctggaacagaacttaaaggagttacaacaggaatatctgagac aacaacgacaaaactggtcatga |
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Protein
| Protein ID | pfu_aug2.0_262.1_07266.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_262.1_07266.t1 MFDTSSSSMSSSTYAVSNLSVTGYDPSVWDPQEIGFVRSRTDMFKSQRGARVDRYVVETNKLIIRLDKLTSSDAPVESSK RRAFEKSVVQWAPDSSVKTCQFCKRNFTLTRRRHHCRLCGDIMCDKCSQFLPHTFAKKLTDPAFQLQSDVDVGFLKRSDS NASLNSILGPEGDPHIRTCANCRKLLERRNDQMEQRNYKPAIVLLYEKMKMCVDNTEDLLREYLPMVESLSAGESIHSLQ KAQMYRVKITKLYETIDGLRRTQEIQQRIAAERLAAIEAQEREKRLQEAKEGGHKYTPSSVKVTEERPRSGSKKLTSWMP SESNINFSDRDDPMIQQMNIIRGYIKQARQAQKFDEVNMLEQNLKELQQEYLRQQRQNWS |
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