Gene
| Gene Model ID | pfu_aug2.0_264.1_13893 |
|---|---|
| Locus | scaffold264.1 : 30787 ... 43175 : - |
| To GenomeBrowser | scaffold264.1:30787..43175 |
| Genes list of scaffold | scaffold264.1 |
| Synonym | pfu_aug1.0_3379.1_37574 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_264.1_13893.t1 | 2 | 1 | NACHT | 246 | 414 | 2.8e-12 | 46.5 | 5.8e-15 | 2.2e-11 | 43.7 |
| pfu_aug2.0_264.1_13893.t1 | 2 | 2 | NACHT | 715 | 750 | 2.8e-12 | 46.5 | 0.53 | 2000.0 | -1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_264.1_13893.t1 | gi|390361066|ref|XP_003729833.1| | PREDICTED: uncharacterized protein LOC100890694 [Strongylocentrotus purpuratus] | 1.0e-13 |
| pfu_aug2.0_264.1_13893.t1 | gi|688552928|ref|XP_009299386.1| | PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like [Danio rerio] | 2.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_264.1_13893.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_264.1_13893.t1 atgagagacggaggaagtgtcccgggtccaccagacaccacgcctgactctgccttaggtaataccgacacagcactgca agcatcaacctctaggacagctttatcatccatatccgatgagctgaacgataataaagaaaagaaaattctgtcagaga agtttctgagaagtatagcggctgatataggcaaggaatggtacttactgtcaatttgtctaggcctcacacaagcggag gtagaacggatacaatatgatggtacatgtgatccagaaacaaagattgttaaagcactactgaaatggagatcaaaatc attccaactctcagctcgcgtacagttggagcatcttattaaagaactactagaaaatgggaggaaagacctcgtggaga aatatggaaaatttctagacgagtctttgttggaacaaatttcagtgggagacgaatccagaactgacgatgaaacaaca aacaacatgctctggaaacatctctttctccttaatgaagaagagactcaacgggtaccggtgtcaccgcttcaaaagtc aggcagccttcctattgatgaaatttatgctccagtatatatcaaagaagacatggaatacaaaagtaagggcagaaata taggaagaatattcaaccttgagaaaaaaagcattcatgttaaacatccaaatgatgttttctatatcaacagagctaaa gatgaaagggcaaggaatatatttttattgggagacgctggtcatggaaaaactgtgttctgtcggaagcttctgaaaca ttggtgccaaggacatgaaaagagaagaactatcgaaccattgaatgattgggaagaaattctttgcgagtttgattatt tgttccaagtgaagttacggcatgtggacgagtgtcggacatctttgatcgatatgatttgtcatgatgtatttgaacgt catcctggttgtcataacgcaatacgggacgttctgtccagtggtttgaagaaatgtttggttgtcgtagacggcctaga tgaatggaaaatttcaaataatgcgaaggccaagcttaaatctgaagggctaccaaatcttgatggaatgggaaatagta caattctttggacatcccgaccatggacatttgatgaactgattgagacaatcggcagcactgacagagttctggaaatt catgggcttgatcattcaggcattgacataattgtcgataatatacttacgaatttctacgaatttcaggtggactcaat tgaatacaaaacagagaagactgaaatcaatgaaaaattaaaagaccaaacattaaaggatctcatgaaaattcctttga ttgccgttgcatgcgttcagatttggcaggaagataaaaagtttgggaacagtaaaacaaacttttacatagccttgata gatttactgatttccagagcactgaaaaagaaagatataacagaatctgacttcgaacagcttgaacaatcttcaagagg gaacgatctgatttcccgtatttttgtcgaaaatgaatatgcgcaagatttttttcctgttctagaaaagctaggtgaaa ttgcgttcaatgaccttgtgtcaaaagaaaagcatcttgttttcaagaaaagatatctccaaaaatgtttaggaaaactc catctcgatttggcactgagggttggtgtactttctcaatgcgaggcgccaagtaatttcaatgaggagaaagtaagcgt ttgttttttccacaaatcgctgcaggaatttcttgctgctatgcatgttactactggaaaaatgtcatgtgattcattct gtacttatttaaacgattttcaagtttgctttgagttagagaatgtgttaattttcatatcgggtttgaactcttcaaat ggacatctgattttacaacacatcgcatcacttggagactctgactcagaggtcattgcctacagagaaacgtgccatgg acgctttaggcataaaatgaagttgctctacaatttacaattgaactgttacagggagttggaacagggaatgaaaacaa gaaaaacgataggtttagttaagtctgaaaatgttataagcgatgtttatttagacaaaaatagtgatgaaactaccgtg cagaatactctaaatattctcttacgccaccatagtagctttaaatccctgactttgctaagtgtatcaaaaagaggcga caatggaattaacagcaaaatgctctctgaaatactcgataacataaaatctcttcagggtttattcatcagcttcttaa actcagatgagatcctttacagattaggaaacatattcaactcgttgacaaccttggcactattccagcttacagtcact tgggatgttatattgcacttaccgacagcactaagcgaaaacaaggtactgaaaaatcttggtctttgggggattcaggt aacagataatagaggtaaagtagacgaacggtacccagcacctttaagtggcgtgattcaaattctaccatttataccaa tgctgacctcattatgcattagagtagacatgcaggaggacaaattgttgctcatggaagtttcgcataaactttcgtat ttacaagaatttcactactttggttcattgcacagtgaagatcatgttattgcgaacgtatattatgacgcactcatcgc aagttcagcattgaataactgtccaatgttacggacctttctcatttatgactgttgcattggtgatggtgaaatatgtc tccagtcgattccttcaacaagaaatgtcgaaaaaataggcttcataagggtcagcatgtcagaggaatgctgggtaaac tttatactgtcactaatggaagtaaagtttgaaatcaatgttgaactatatgaatcagacattagtgaagaatgtcaatc gatgctttgttcactaccgtattttgaaataataacatccgatattaatgcagatggcaaattaagaattgaattcaaaa aattaccaatccagttatag |
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Protein
| Protein ID | pfu_aug2.0_264.1_13893.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_264.1_13893.t1 MRDGGSVPGPPDTTPDSALGNTDTALQASTSRTALSSISDELNDNKEKKILSEKFLRSIAADIGKEWYLLSICLGLTQAE VERIQYDGTCDPETKIVKALLKWRSKSFQLSARVQLEHLIKELLENGRKDLVEKYGKFLDESLLEQISVGDESRTDDETT NNMLWKHLFLLNEEETQRVPVSPLQKSGSLPIDEIYAPVYIKEDMEYKSKGRNIGRIFNLEKKSIHVKHPNDVFYINRAK DERARNIFLLGDAGHGKTVFCRKLLKHWCQGHEKRRTIEPLNDWEEILCEFDYLFQVKLRHVDECRTSLIDMICHDVFER HPGCHNAIRDVLSSGLKKCLVVVDGLDEWKISNNAKAKLKSEGLPNLDGMGNSTILWTSRPWTFDELIETIGSTDRVLEI HGLDHSGIDIIVDNILTNFYEFQVDSIEYKTEKTEINEKLKDQTLKDLMKIPLIAVACVQIWQEDKKFGNSKTNFYIALI DLLISRALKKKDITESDFEQLEQSSRGNDLISRIFVENEYAQDFFPVLEKLGEIAFNDLVSKEKHLVFKKRYLQKCLGKL HLDLALRVGVLSQCEAPSNFNEEKVSVCFFHKSLQEFLAAMHVTTGKMSCDSFCTYLNDFQVCFELENVLIFISGLNSSN GHLILQHIASLGDSDSEVIAYRETCHGRFRHKMKLLYNLQLNCYRELEQGMKTRKTIGLVKSENVISDVYLDKNSDETTV QNTLNILLRHHSSFKSLTLLSVSKRGDNGINSKMLSEILDNIKSLQGLFISFLNSDEILYRLGNIFNSLTTLALFQLTVT WDVILHLPTALSENKVLKNLGLWGIQVTDNRGKVDERYPAPLSGVIQILPFIPMLTSLCIRVDMQEDKLLLMEVSHKLSY LQEFHYFGSLHSEDHVIANVYYDALIASSALNNCPMLRTFLIYDCCIGDGEICLQSIPSTRNVEKIGFIRVSMSEECWVN FILSLMEVKFEINVELYESDISEECQSMLCSLPYFEIITSDINADGKLRIEFKKLPIQL |
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