Gene
| Gene Model ID | pfu_aug2.0_264.1_13897 |
|---|---|
| Locus | scaffold264.1 : 137346 ... 148359 : + |
| To GenomeBrowser | scaffold264.1:137346..148359 |
| Genes list of scaffold | scaffold264.1 |
| Synonym | pfu_aug1.0_2791.1_51801 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_264.1_13897.t1 | 1 | 1 | TENA_THI-4 | 52 | 234 | 4.1e-09 | 36.5 | 3.6e-13 | 5.3e-09 | 36.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_264.1_13897.t1 | gi|390363969|ref|XP_003730490.1| | PREDICTED: uncharacterized protein LOC100892956 [Strongylocentrotus purpuratus] | 2.0e-39 |
| pfu_aug2.0_264.1_13897.t1 | gi|390363971|ref|XP_003730491.1| | PREDICTED: uncharacterized protein LOC100893025 [Strongylocentrotus purpuratus] | 3.0e-39 |
| pfu_aug2.0_264.1_13897.t1 | gi|390362051|ref|XP_003730066.1| | PREDICTED: uncharacterized protein LOC764526 isoform X1 [Strongylocentrotus purpuratus] | 5.0e-39 |
| pfu_aug2.0_264.1_13897.t1 | gi|390362049|ref|XP_001200862.2| | PREDICTED: uncharacterized protein LOC764526 isoform X3 [Strongylocentrotus purpuratus] | 2.0e-37 |
| pfu_aug2.0_264.1_13897.t1 | gi|260814343|ref|XP_002601875.1| | hypothetical protein BRAFLDRAFT_75908 [Branchiostoma floridae] | 5.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_264.1_13897.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_264.1_13897.t1 atgagtaaaaggaaaggtcgacagcttgtaatatctgctgtagaacacctgaatccagagcagctgactaccaaatgtat ccaagatgttaagatatgcgatgagttatggacttcaaccctggactctagaaaccaggccttgcagacggggtttgtcc aaggattaagaaatgcaagcttggatccaactgattttggtggatacatggtgcaagattctgtatactgcttcgaggca aaaggagcactggatattgctgcttcaaaatcacataaaatcccaggactaaaggcattcctagaagcccaagctaaatc ctatgaagaatattatgaggacctgtataaggaatggcatataaagtcagcaaatggcatatgtctaaacagcgcatgtc agaattacgtagatgaattgacttctgtggcaaaagactacgatcctatatatcttgttgcagcatgcattccatgtgcc aaattatggccatggttaggacaggaactacacaactcacagcataattttggatgttatggcacatgggtcgatgagaa cttcaatccaactagcgtgtcatataagaagctggaagcttttgtcaatgctgcatatgtcgaaaaaatgatagacgagg ctacgctgacaaagatatacagtacatgcatgcagtgtgaggctgacttcttcggatctgccacagcttaa |
|
Protein
| Protein ID | pfu_aug2.0_264.1_13897.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_264.1_13897.t1 MSKRKGRQLVISAVEHLNPEQLTTKCIQDVKICDELWTSTLDSRNQALQTGFVQGLRNASLDPTDFGGYMVQDSVYCFEA KGALDIAASKSHKIPGLKAFLEAQAKSYEEYYEDLYKEWHIKSANGICLNSACQNYVDELTSVAKDYDPIYLVAACIPCA KLWPWLGQELHNSQHNFGCYGTWVDENFNPTSVSYKKLEAFVNAAYVEKMIDEATLTKIYSTCMQCEADFFGSATA |
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