Gene
| Gene Model ID | pfu_aug2.0_264.1_13902 |
|---|---|
| Locus | scaffold264.1 : 207624 ... 216587 : + |
| To GenomeBrowser | scaffold264.1:207624..216587 |
| Genes list of scaffold | scaffold264.1 |
| Synonym | pfu_aug1.0_3574.1_30451 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| l-rhamnose-binding lectin csl3-like | GO:0030246 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_264.1_13902.t1 | 1 | 1 | Gal_Lectin | 111 | 150 | 2.7e-08 | 33.9 | 5.2e-11 | 7.8e-07 | 29.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_264.1_13902.t1 | gi|185134480|ref|NP_001117668.1| | rhamnose binding lectin STL2 precursor [Oncorhynchus mykiss] | 3.0e-08 |
| pfu_aug2.0_264.1_13902.t1 | gi|658860744|ref|XP_008413129.1| | PREDICTED: L-rhamnose-binding lectin CSL3-like [Poecilia reticulata] | 2.0e-07 |
| pfu_aug2.0_264.1_13902.t1 | gi|260811470|ref|XP_002600445.1| | hypothetical protein BRAFLDRAFT_109205 [Branchiostoma floridae] | 3.0e-07 |
| pfu_aug2.0_264.1_13902.t1 | gi|390344468|ref|XP_003726129.1| | 8.0e-07 | |
| pfu_aug2.0_264.1_13902.t1 | gi|617524837|ref|XP_007545054.1| | PREDICTED: L-rhamnose-binding lectin CSL3-like [Poecilia formosa] | 9.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_264.1_13902.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_264.1_13902.t1 atgacgggtcctgtccaaacctctttagagaagacagggccccgaccacctgttatctctgaatgtcctgcggactccct aggtgatcacatgcatgaactcgctacagtcggcagagcacggactgtaatcgtagaaaacggaaccaatatgtacagaa tcctagctcatttgctactcatccattcactggttcttactgcctcagcttcaagaaaagttgttgtagcaagagaacgc actgatgcaagactgtcatgctcaagaggatccataactattctctccgcaatctatggtaagggaccaaacggcaaatg ggagataggaatggatgaggcgaggggaagatgcaatggtaagaagaggtgcagagtgccttcacacaacagggtgttcg gcgaccctgcttttggagttgttaaagatctggtcatcgcttatgaatgctaa |
|
Protein
| Protein ID | pfu_aug2.0_264.1_13902.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_264.1_13902.t1 MTGPVQTSLEKTGPRPPVISECPADSLGDHMHELATVGRARTVIVENGTNMYRILAHLLLIHSLVLTASASRKVVVARER TDARLSCSRGSITILSAIYGKGPNGKWEIGMDEARGRCNGKKRCRVPSHNRVFGDPAFGVVKDLVIAYEC |
|