Gene
| Gene Model ID | pfu_aug2.0_2640.1_02206 |
|---|---|
| Locus | scaffold2640.1 : 3056 ... 46705 : - |
| To GenomeBrowser | scaffold2640.1:3056..46705 |
| Genes list of scaffold | scaffold2640.1 |
| Synonym | pfu_aug1.0_2689.1_66426 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2640.1_02206.t1 | 3 | 1 | F5_F8_type_C | 58 | 176 | 2.6e-37 | 127.5 | 3.6e-16 | 2.7e-12 | 46.6 |
| pfu_aug2.0_2640.1_02206.t1 | 3 | 2 | F5_F8_type_C | 220 | 289 | 2.6e-37 | 127.5 | 6.1e-11 | 4.5e-07 | 29.7 |
| pfu_aug2.0_2640.1_02206.t1 | 3 | 3 | F5_F8_type_C | 331 | 447 | 2.6e-37 | 127.5 | 1.7e-16 | 1.3e-12 | 47.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2640.1_02206.t1 | gi|260835699|ref|XP_002612845.1| | hypothetical protein BRAFLDRAFT_118409 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_2640.1_02206.t1 | gi|729742638|ref|XP_010567630.1| | PREDICTED: alanine aminotransferase 1 [Haliaeetus leucocephalus] | 0.0 |
| pfu_aug2.0_2640.1_02206.t1 | gi|585674321|ref|XP_006818585.1| | PREDICTED: uncharacterized protein LOC102809222 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_2640.1_02206.t1 | gi|694851254|ref|XP_009466921.1| | PREDICTED: uncharacterized protein LOC104015857 [Nipponia nippon] | 0.0 |
| pfu_aug2.0_2640.1_02206.t1 | gi|641801401|ref|XP_008163409.1| | PREDICTED: uncharacterized protein LOC103305731 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2640.1_02206.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2640.1_02206.t1 atgtacttgttttcgatcctgctctgctttctttcctgtaaagcgtacggacatggttatgatgattttgaagaagaaac accgataccagctgcatttcagaaaatgtctaatggttcgctgaaaaaccttgcgttaaagaagcctacgttccaaagct caactttaaccgtctccaaatcggagaaggctgttgatggaatcagtaatccagattggaaagcaggatcgtgtgcacat acgctttctgaaactcatccatactggcttgtcgaccttggaagaaagcatcttatacagcgtgtggagataacaaacag agaagactgttgtgttgcacgactacacgatgtagaagtaaccgtagctggagacgataagaattttgacgtatcatgtg gtatattcaagggaccaggactccccgcacagaaagtggtccaaacatgccctgttggaatcagtgggagatatgtaaag ctccagatcataaagggaaccaaaaatatcctaacactctgcgaggttcggataaggaatgctaattattccgtcgtgga ctcggctagtaagagcgaggcatcgatgagagatgaaaatgtacaagacgaggtatgtcgatttggtccactaagaaact tggcatacagaaaaacgacgtaccaaagttctacctataaatctgcaatctcgtacaaagcagttgatggtataagtaat tcacattggaaaggagggtcttgtgcgcatactggtgctgaacaccatccgtactggtatgtggacctgggtaaagaaca cattatcgagcgtatcagaataacaaacagaggggattgctgctatgaacgactacacaatgtggatgttactgtggcag gacatgataagagatttgatgtgttatgcggcacgttcaatggacctggtccactgaaaaacttggcactcatgaaaaag acgttccaaagttctacttgttgtgctgccaagccaggaagagccgtagatggtataagaaattcactatggattgcaga gtcgtgttcatcaacgaagcctgaaaaccatccgtactggtatgtggacctgggtaaagagcatattatcgaacgtgtca gagtaacaaatagaggggattgctgccctgggcgactgcatgatgttgacgttactgtggctgggcatgataagaggttt gatatatcatgcggcttcttcaagggacctggtatagcgtcccagagagtagtgttccagtgtgccaagggaacaaaggg cagatatgttcgacttcagatcaccaaaggatccagaaattacctcacattgtgcgaagttgaagtcataggaaaatag |
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Protein
| Protein ID | pfu_aug2.0_2640.1_02206.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2640.1_02206.t1 MYLFSILLCFLSCKAYGHGYDDFEEETPIPAAFQKMSNGSLKNLALKKPTFQSSTLTVSKSEKAVDGISNPDWKAGSCAH TLSETHPYWLVDLGRKHLIQRVEITNREDCCVARLHDVEVTVAGDDKNFDVSCGIFKGPGLPAQKVVQTCPVGISGRYVK LQIIKGTKNILTLCEVRIRNANYSVVDSASKSEASMRDENVQDEVCRFGPLRNLAYRKTTYQSSTYKSAISYKAVDGISN SHWKGGSCAHTGAEHHPYWYVDLGKEHIIERIRITNRGDCCYERLHNVDVTVAGHDKRFDVLCGTFNGPGPLKNLALMKK TFQSSTCCAAKPGRAVDGIRNSLWIAESCSSTKPENHPYWYVDLGKEHIIERVRVTNRGDCCPGRLHDVDVTVAGHDKRF DISCGFFKGPGIASQRVVFQCAKGTKGRYVRLQITKGSRNYLTLCEVEVIGK |
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