Gene
| Gene Model ID | pfu_aug2.0_2648.1_28897 |
|---|---|
| Locus | scaffold2648.1 : 57898 ... 71285 : - |
| To GenomeBrowser | scaffold2648.1:57898..71285 |
| Genes list of scaffold | scaffold2648.1 |
| Synonym | pfu_aug1.0_40070.1_41156 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2648.1_28897.t1 | 3 | 1 | XAP5 | 61 | 81 | 5.9e-31 | 107.8 | 2.0 | 15000.0 | -5.7 |
| pfu_aug2.0_2648.1_28897.t1 | 3 | 2 | XAP5 | 105 | 173 | 5.9e-31 | 107.8 | 2.9e-12 | 2.2e-08 | 34.0 |
| pfu_aug2.0_2648.1_28897.t1 | 3 | 3 | XAP5 | 175 | 232 | 5.9e-31 | 107.8 | 4.1e-28 | 3.0e-24 | 85.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2648.1_28897.t1 | gi|585704994|ref|XP_002740323.2| | PREDICTED: LOW QUALITY PROTEIN: protein FAM50A-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_2648.1_28897.t1 | gi|676492023|ref|XP_009065787.1| | hypothetical protein LOTGIDRAFT_222603 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2648.1_28897.t1 | gi|524875885|ref|XP_005094665.1| | PREDICTED: protein FAM50 homolog isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_2648.1_28897.t1 | gi|195113977|ref|XP_002001544.1| | GI21926 [Drosophila mojavensis] | 0.0 |
| pfu_aug2.0_2648.1_28897.t1 | gi|195445266|ref|XP_002070249.1| | GK11956 [Drosophila willistoni] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2648.1_28897.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2648.1_28897.t1 atggctcactacaaaggagcggcctcagaagggggaagggcacaaatcctcatgaaaaagaggcaaaaagagcaggaaga aatagaaaaccgtaagcggaaaattgaagaggaacttcgtattggaagcatacagaataaatttgctactcactatgatg ccgttgaacaacagctcaaatccaatactattgggcttgtcacattggatgaaatgaaggcaaagcaagaagatgttatt aagaggagagaaaaacagcttgccaaaaaagatgctgaggcacgcctcattgaaaaacgcaaagaggataaaaagaaaaa agagaggatgaagattgcccatctttcctttgatccaaatgaagatgaagaggatgaagaagatgatactgacgaggagg aggaggaagaggaggaggtctcacctccagctgataaaaagaggaggagacttggtaaaaatccagatgttgacacaagc ttccttcctgacagagatagagaagaagaggaaaataaattaagttttgacgttcacgatgacgtgagacttattaatga tgcatctattgaaaaagacgaatctcatgccggcaaagtttgcttgcggtcttggtatgagcgaaataaacatatcttcc cagcaagtcgatgggagccttatgatcctgagaaaagatgggactcttatacagtgtcagataaaaacgctattaaaatc actgtaaaatga |
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Protein
| Protein ID | pfu_aug2.0_2648.1_28897.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2648.1_28897.t1 MAHYKGAASEGGRAQILMKKRQKEQEEIENRKRKIEEELRIGSIQNKFATHYDAVEQQLKSNTIGLVTLDEMKAKQEDVI KRREKQLAKKDAEARLIEKRKEDKKKKERMKIAHLSFDPNEDEEDEEDDTDEEEEEEEEVSPPADKKRRRLGKNPDVDTS FLPDRDREEEENKLSFDVHDDVRLINDASIEKDESHAGKVCLRSWYERNKHIFPASRWEPYDPEKRWDSYTVSDKNAIKI TVK |
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