Gene
| Gene Model ID | pfu_aug2.0_2648.1_28898 |
|---|---|
| Locus | scaffold2648.1 : 71396 ... 88306 : + |
| To GenomeBrowser | scaffold2648.1:71396..88306 |
| Genes list of scaffold | scaffold2648.1 |
| Synonym | pfu_aug1.0_1618.1_58603 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2648.1_28898.t1 | 1 | 1 | NIF | 223 | 371 | 2.5e-35 | 121.4 | 6.2e-39 | 4.6e-35 | 120.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2648.1_28898.t1 | gi|524900102|ref|XP_005106475.1| | PREDICTED: mitochondrial import inner membrane translocase subunit TIM50-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_2648.1_28898.t1 | gi|260834727|ref|XP_002612361.1| | hypothetical protein BRAFLDRAFT_265448 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_2648.1_28898.t1 | gi|241642135|ref|XP_002409394.1| | mitochondrial import inner membrane translocase subunit TIM50, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_2648.1_28898.t1 | gi|390344582|ref|XP_786728.3| | 0.0 | |
| pfu_aug2.0_2648.1_28898.t1 | gi|390344580|ref|XP_794459.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2648.1_28898.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2648.1_28898.t1 atggccgcgctcatgaggtgcgagtttcatttttatgtaaaacgggcatttcctctatgtagaaggctgtcatcgatctc tttcaacagaaactgcattcaacatagtaacaagtgtacattaaaacgtgatccttttcctaccatttgtttctgtgttt cgtcattcggtatattgcaacacccttgcctgaaacaaaatgtgcgttttgtctccaagtcaaggacttcagtatttgaa agtgtagatccaaataagaataacagcaaagaagaagaagatgaaaatgttcaaagtgagaaagagaaagaaaagaaaga acggatgaagaaatggttaaagatttttggaatcacggtctttccactgtgtattggttctacaatatatgcaatgggta agaacatagacctcaatatttccttcatcttgcaagcaagaggtccgagcatagtgatgattaattcgacaaattttatt aacgattatcgggacgctatcgcagagatgttgaaattaaccggtccatgcgaaactgtatttgtgattgaacagtatct taggagagcatacaagagagcaaggcttatggaaaaggaaattatagaaccatcgagagagaagttacttcctgagccct tacagtatccctacattcagcctccctatacactggtcctggagatgacaggaattctggttcatccgtgctggtcgttt aatacaggatggaggttcaaaaagcgaccaggcttagactacttcttaaaagctgtcggtccacccatgttcgagacagt cattttcacaaaagaaagtggaatgaatgctgacccacttttgaataatctggacccagagggccacatcatgtacagac tttaccgtgacgccacacgctatacaaataatatacatgtgaaggacctttcatgcttgaatcgtgatctgtcacgagtg atatttatagactgggataaagaggcctttcaacttcagaagagtaatgctttccgactgaagaaatatgacggagagga tgatgatagatacctggtcgacttagctcattttcttcaagctattgcggcttctaaagtagaggatgtaagacctgtgc tagattactacagccaatttgatgaaccattggagaagttcaaagagaatcaagccaaactgcaggaagagcaggagaaa atggcagctcagatcaaacaacaacaaaaaaatccaggacttggcggtttctccacaggattttttcgcaggtcatga |
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Protein
| Protein ID | pfu_aug2.0_2648.1_28898.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2648.1_28898.t1 MAALMRCEFHFYVKRAFPLCRRLSSISFNRNCIQHSNKCTLKRDPFPTICFCVSSFGILQHPCLKQNVRFVSKSRTSVFE SVDPNKNNSKEEEDENVQSEKEKEKKERMKKWLKIFGITVFPLCIGSTIYAMGKNIDLNISFILQARGPSIVMINSTNFI NDYRDAIAEMLKLTGPCETVFVIEQYLRRAYKRARLMEKEIIEPSREKLLPEPLQYPYIQPPYTLVLEMTGILVHPCWSF NTGWRFKKRPGLDYFLKAVGPPMFETVIFTKESGMNADPLLNNLDPEGHIMYRLYRDATRYTNNIHVKDLSCLNRDLSRV IFIDWDKEAFQLQKSNAFRLKKYDGEDDDRYLVDLAHFLQAIAASKVEDVRPVLDYYSQFDEPLEKFKENQAKLQEEQEK MAAQIKQQQKNPGLGGFSTGFFRRS |
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