Gene
| Gene Model ID | pfu_aug2.0_265.1_17212 |
|---|---|
| Locus | scaffold265.1 : 260140 ... 263709 : + |
| To GenomeBrowser | scaffold265.1:260140..263709 |
| Genes list of scaffold | scaffold265.1 |
| Synonym | pfu_aug1.0_7847.1_45741 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_265.1_17212.t1 | 2 | 1 | Globin | 29 | 127 | 1.8e-06 | 28.2 | 5.3e-10 | 3.9e-06 | 27.1 |
| pfu_aug2.0_265.1_17212.t1 | 2 | 2 | Globin | 153 | 161 | 1.8e-06 | 28.2 | 1.6 | 12000.0 | -3.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_265.1_17212.t1 | gi|196007506|ref|XP_002113619.1| | hypothetical protein TRIADDRAFT_57230 [Trichoplax adhaerens] | 2.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_265.1_17212.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_265.1_17212.t1 atgggcagttcgcatggacattgtaataagttaagggagaattctttctcgaaattagaggaggagttagatgatcgcca gaaactactgacacaggaaactttagagttaatgagagaatatctgagtgatctaggtatcgttgtattcttacgatttt tcgagattgaaccccgtatgaagctgctatttccaaagattgttcatcttgactcagacaataagttggcaatagagcca gacgtacaccgtgtcctgagaatacatgcggcttctgtgatgtacagcctgggagctgccgtggagtgtctggatcaggc agaactatttggagtcattgctgaagatatcgggaaacttcatgcagatagacatatcaaaataaatacgattcatcgcc tttggccctcacttaactatggtctgaagcagattctgggcgactcctacaccaaggacgtggcaaaggcgtggaggaag gtgttttactatatctgccggaggatggaacaaggaatggcaggcaaaatatcctcagagagctcagataggagctctgg ggaaagcggaaactactga |
|
Protein
| Protein ID | pfu_aug2.0_265.1_17212.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_265.1_17212.t1 MGSSHGHCNKLRENSFSKLEEELDDRQKLLTQETLELMREYLSDLGIVVFLRFFEIEPRMKLLFPKIVHLDSDNKLAIEP DVHRVLRIHAASVMYSLGAAVECLDQAELFGVIAEDIGKLHADRHIKINTIHRLWPSLNYGLKQILGDSYTKDVAKAWRK VFYYICRRMEQGMAGKISSESSDRSSGESGNY |
|