Gene
| Gene Model ID | pfu_aug2.0_265.1_17213 |
|---|---|
| Locus | scaffold265.1 : 269250 ... 290229 : + |
| To GenomeBrowser | scaffold265.1:269250..290229 |
| Genes list of scaffold | scaffold265.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| histidine isoform c | GO:0004398 GO:0005737 GO:0006520 GO:0007430 GO:0007476 GO:0016246 GO:0030170 GO:0035071 GO:0035147 GO:0035155 GO:0042051 GO:0043052 GO:0048675 GO:0050768 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_265.1_17213.t1 | 3 | 1 | Pyridoxal_deC | 23 | 144 | 0.0 | 242.3 | 1.99993e-41 | 1.5e-37 | 128.9 |
| pfu_aug2.0_265.1_17213.t1 | 3 | 2 | Pyridoxal_deC | 174 | 194 | 0.0 | 242.3 | 0.45 | 3300.0 | -3.9 |
| pfu_aug2.0_265.1_17213.t1 | 3 | 3 | Pyridoxal_deC | 224 | 348 | 0.0 | 242.3 | 1.1e-35 | 8.2e-32 | 110.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_265.1_17213.t1 | gi|676462557|ref|XP_009056307.1| | hypothetical protein LOTGIDRAFT_119964, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_265.1_17213.t1 | gi|442623153|ref|NP_001260856.1| | histidine decarboxylase, isoform C [Drosophila melanogaster] | 0.0 |
| pfu_aug2.0_265.1_17213.t1 | gi|170049525|ref|XP_001870900.1| | aromatic amino acid decarboxylase [Culex quinquefasciatus] | 0.0 |
| pfu_aug2.0_265.1_17213.t1 | gi|194857992|ref|XP_001969078.1| | GG24151 [Drosophila erecta] | 0.0 |
| pfu_aug2.0_265.1_17213.t1 | gi|195582124|ref|XP_002080878.1| | GD10721 [Drosophila simulans] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_265.1_17213.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_265.1_17213.t1 atggttgactacatagcagactatctacaaactatcagatccagacgagtcttcccggatgtctcaccggggtacatgcg caatcttgtaccggaagcagcacctcttgaaggcgaaccatggaccgatatagtccgagatattgaaagagtgattatgc ctggggtagggcatgcaaatcaatcaggctttgtgacccactggcagagtccgtacatgcacgcatattttcccgccctg aattcgttcccctcattacttggagacatgttagcagatgctattggatgtttaggctttacatgggcagctagtccggc atgtacggaactggaaacaatagtaatggattggttgggaaagatgataggtatacctgtggaattcctccacagtaaca aacagaataaaggaggcggggttatacaggtatacctgtggaattcctccacagcaagaaacagaataaagaaagcgggg ttatacaggtatgaatattggttgtcagggaggaatataggtatgcctgtggaattcctctacagtagtaaacaggataa aggaggcggggttatacaagtatgtgtattggtggttaaggaggattataggtatatcgtggaattcctcaacagtaaca aacagaataaagaggcggggttatacaggtatgtatataggtggttagggaggattattggtatacctgtggaattcctc cacagtaacaaacagaataaaggaggcggggttatacagttgacagcttctgattgtaccttcataacaatgctggcggc aagaacagaggtatttcggaagtacaaatgtgcaagtctgggtctggatgaagcagagatcaactccagactggtagctt actgctcagaccaggcccactcgtctgtagagaaagctggactgatttcattggtgaagatgaggtttataccatctgac gaggatctgagtctgcgcggtcacgctctgcaagacgccatatcacgtgacagggaggagggattgataccattttatgt acgtattcatgctccgcttttcaacatcttcaggtttttaaaggaaattgtacttatataa |
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Protein
| Protein ID | pfu_aug2.0_265.1_17213.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_265.1_17213.t1 MVDYIADYLQTIRSRRVFPDVSPGYMRNLVPEAAPLEGEPWTDIVRDIERVIMPGVGHANQSGFVTHWQSPYMHAYFPAL NSFPSLLGDMLADAIGCLGFTWAASPACTELETIVMDWLGKMIGIPVEFLHSNKQNKGGGVIQVYLWNSSTARNRIKKAG LYRYEYWLSGRNIGMPVEFLYSSKQDKGGGVIQVCVLVVKEDYRYIVEFLNSNKQNKEAGLYRYVYRWLGRIIGIPVEFL HSNKQNKGGGVIQLTASDCTFITMLAARTEVFRKYKCASLGLDEAEINSRLVAYCSDQAHSSVEKAGLISLVKMRFIPSD EDLSLRGHALQDAISRDREEGLIPFYVRIHAPLFNIFRFLKEIVLI |
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