Gene
| Gene Model ID | pfu_aug2.0_265.1_17214 |
|---|---|
| Locus | scaffold265.1 : 290500 ... 303245 : + |
| To GenomeBrowser | scaffold265.1:290500..303245 |
| Genes list of scaffold | scaffold265.1 |
| Synonym | pfu_aug1.0_89.1_57963 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| aromatic amino acid decarboxylase | GO:0003824 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_265.1_17214.t1 | 1 | 1 | Pyridoxal_deC | 1 | 67 | 7.6e-22 | 77.2 | 1.7e-25 | 1.3e-21 | 76.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_265.1_17214.t1 | gi|325297064|ref|NP_001191536.1| | histidine decarboxylase [Aplysia californica] | 0.0 |
| pfu_aug2.0_265.1_17214.t1 | gi|641647799|ref|XP_008179690.1| | PREDICTED: histidine decarboxylase [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_265.1_17214.t1 | gi|157106083|ref|XP_001649159.1| | AAEL014632-PA [Aedes aegypti] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_265.1_17214.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_265.1_17214.t1 atgcactggcagataccattgagtcgtcgtttccgagctttgaaactctggtttacgattcgatcgtttggcatagaggg aattcagcggcatatccgagagggtgttcgattggccagcaggtttgagaagaatgtgagccaggaccagaggtttgaaa taccagcaaaaagaatcctaggaatggtcgtatttaggctctggggtgacaatgatctcacagaaaatttgctgaaacga ttaaacaaatctggaaaagtacacatggtacctgccagtctaaaaggaaaatacgtcattagatttacggtgacgtcaca gtacactacggaatctgacatcgacagagattggaaaatcattgcagatactaccactaaggttctaaaggacactgagt ctgacgaggatgaagctttcagtgatgaggaagtgtccagtccagaggaaccaaaacttctcatcaggacgccatccaag aaaaaagagtttggtatgagtttattactgagtaacgttcctatgtccccgaaacttataaatggaagttttgccgctct gtttgacaacaatgacgttattgttgagtacgctaaaagaatcaccagcagcgattttaatggtcgtcccatccgtctgt cccccaggagaaagctccgcctacgtgaccaatccaaacaacagagtttagattttgctatacaaccttcaaagcaccca tcttcaaaattcaaacagagctctttggattcaaagattgaacagatcctagaaaaaagctgcgaaatagaggagatgca aaaaatagaagataacagtgaaactgatgattttgaggaggttagcattcggtcatatgacaaacctgtacagatcccaa acgtcaagtcgcagaatgcgaatgggcatttgaagttaccatgtctctgcaagtattgtggaaagccgtatgacaactga |
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Protein
| Protein ID | pfu_aug2.0_265.1_17214.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_265.1_17214.t1 MHWQIPLSRRFRALKLWFTIRSFGIEGIQRHIREGVRLASRFEKNVSQDQRFEIPAKRILGMVVFRLWGDNDLTENLLKR LNKSGKVHMVPASLKGKYVIRFTVTSQYTTESDIDRDWKIIADTTTKVLKDTESDEDEAFSDEEVSSPEEPKLLIRTPSK KKEFGMSLLLSNVPMSPKLINGSFAALFDNNDVIVEYAKRITSSDFNGRPIRLSPRRKLRLRDQSKQQSLDFAIQPSKHP SSKFKQSSLDSKIEQILEKSCEIEEMQKIEDNSETDDFEEVSIRSYDKPVQIPNVKSQNANGHLKLPCLCKYCGKPYDN |
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