Gene
| Gene Model ID | pfu_aug2.0_265.1_17215 |
|---|---|
| Locus | scaffold265.1 : 310000 ... 317444 : + |
| To GenomeBrowser | scaffold265.1:310000..317444 |
| Genes list of scaffold | scaffold265.1 |
| Synonym | pfu_aug1.0_209996.1_35800 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_265.1_17215.t1 | 2 | 1 | Exo_endo_phos_2 | 349 | 382 | 3.2e-08 | 33.2 | 2.7 | 6600.0 | -3.4 |
| pfu_aug2.0_265.1_17215.t1 | 1 | 1 | Exo_endo_phos | 461 | 619 | 2.3e-07 | 31.0 | 1.5e-10 | 3.7e-07 | 30.3 |
| pfu_aug2.0_265.1_17215.t1 | 2 | 2 | Exo_endo_phos_2 | 551 | 627 | 3.2e-08 | 33.2 | 3.1e-11 | 7.6e-08 | 31.9 |
| pfu_aug2.0_265.1_17215.t1 | 2 | 1 | RVT_1 | 696 | 913 | 2.0e-30 | 105.7 | 1.1e-23 | 2.8e-20 | 72.6 |
| pfu_aug2.0_265.1_17215.t1 | 2 | 2 | RVT_1 | 1081 | 1186 | 2.0e-30 | 105.7 | 6.4e-11 | 1.6e-07 | 30.9 |
Transcript
| Transcript ID | pfu_aug2.0_265.1_17215.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_265.1_17215.t1 atgacaactggaacgtatatacttcagagtaaccgtgctgttttcaataagtcattagtagatccaacatgcttactggg tgggtctgaatcagaaacattgggtcattttctacttaaatgtgataagcttgatgtgaaacgtagaactatttatgatg aactggcagcatgtgtgcacaatgtgactggagttgatatgtctctattgcctgtagatgaacaattacaaattattctt gacatagggcattgtacaatacctgaactttctaaaatgaacattcatgatagatcacttattgaacatcataccagacg tttgtgctatgccttgcactctagcagatattatcaaatgtatcttgtgaacgtactagaacttgtatatgatagaaata atgtacaaatcctgaacgaccgtatacgtagtgcatgttctgagtacttgtgtgcagtaggaagtgaaagtgagaatagt aagaaagttgacattttttgcttagtctgtagtaagagatgtttgactaggtcaacacagtgtagtatttgtcaaaaatg ggtacactataaatgtgaaaagctccatcctgttgttattagtgaattagaaactgagagaaatgctcgttttacatgta aaacctgtaagtcagcttctgtaacaaagcaaaatacactttctttgacaactggtccttgtgatgataatactgtacat tgtgttaagtcgaaagctgtcacctgtaatgcagataagtctatagaacaagagtctgtcagtcaagagtcacatgtgca agagttaacaagaaatgtagtcgcatgtaagtcaaaagagcaaaggtcagaaagttgtgttttgatagagcatgattcag ttgacaatgtacatgaatcaaggtatgaaaacgaggcgagtaaagagcatcaaactagctgtatgatctgtaatactcct attattaacattgagagagagttgcgatctcatgaggaggatgaagaaagacgaaaagcatacatcgcacagatagaagc aagaaatgccgaactgcagcagactgttcgtatattaaaacgtaggattgtaatgttagaggattcatccatcgactcat ctcagacattgaaaaatcagagtacaaacagcggcttatcgcagaatgacgtagaaaaatctagcgaaacaaacaagttg attgaaggaatccatgaaaaagtcactaattttatagtgcgtaaagttgacaaggaactacaagcacttgatgtagtaaa tggtgctagtgcaataccgacaaatgttgctaatagaactttcgtaaatcagcagatacctagtgcacaagtaccgctca tgagttccaacgcaataactgaaatgatggaaactgcagattttatgtttttacaagaacattggctttttaactttcaa ctacccatgttaaacgaaatctgtgagaatgttctaagcactggtaagtcagtagacgatggtaaccccataacacctat acagaaaccaagaggctatggtggtgtcggcattttatggaacatacgtcacgaccataacgtcactgtcttggataatg gttgtcacagaattcagtgcatatcggtgaaaacagacgacatgccacttctacttgtctccgtttatttaccaacaaag tcaggtcagggtcacaatgaggagtttgttgattgtatcgaccaactacgtgagatcactgagaaatacatggactctca caatattttaattggaggcgacttcaacgaatctgtaaatgaaataaatcgcaacagtaggagggctgaatgcataaaga gttttataatggattacgaatttactgttatcaacgaaatctctgtcactactgaagacatcagtgatgctataaagaaa ctcaattgcggcaaggctcctgatgcctatggtataatgtctgaacacattgtgtatctagatgaagagatcctgtccgt tttatgtaatatttacaatgccatatttaatcttcaaactgtacccgacgtactgaaacttgacacgatatcacctgtat tcaaaaagaaaggtaagcgctctgaatcaaagaactatagaggtatcaccgtattacctgtcctaggcaaacttctagaa atagtcgtcagagatcatctccgtattgtattagacccacaacaaaacccgttgcaaagaggatttacagcagggtcctc tccgttaaactgcgctctactaatggagaagtttatcagggaatgtcaagatatagatttacaaccttttctggcactat tggatgccaaatctgcctttgacgtagttagacaccacaacttattcagaaaactgtacatatctggagtacaaggatcc ctatggaatatcatctatagtcttcacaacaactcggtccgtgctgttaagtggggaggtcaacgttcatgcacattcaa tgtcacacaaggtgtaaaacaaggcgggattttaaatgccgatttatacaaattgtacgtaaacgaccttcttaatcgca tctttgaaagcaacgtaggtggacatattggcgatatcccttgtaacgcacctacatgtgcagacgacatgtcatccaca agctcagataaaaatcagttacagcaactctgcaacatggcgaaagactacagtgagatggagcactaccaactccaacc tacaaagagtgtcgtgttaccaattagtaaaaaaggatctaggaagactcgacaagaaacatacgcctggaaaattggtg acactcccatgcctgtagtcgataatgctgtacatgttggcgtgaaaaggacgtctaaacctacagccacaggagcaata gaagaaaacatatcaaaagctagaaagactatgtacagtcttatgtcttcaggtttgcatggtaacaacggtctggaccc gggttcatgcattcatctactgaaagtatatgtcataccagtattgcttgcaaatacagtcaacgaaatctctgtcacta ctgaagacatcagtgttgctataaagaaacttcattgcggcaaggctcctgatgcctatggtatgatgtctgaacacatt gtgtatctagatgaagagatcctgtcacttttatgtaatatttacaatgcaatatttaatcttcaaactgtacccgacgt actgaaacttggcacgatatcacctgtattcaaaaagaaagataagcgctctgaatcaaagaactacagaggtatcaccg tattaccagtcctaggcaaacttctagaaatagtcgtcagagatcatctccgtattgtcttagacccacaacaaaacccg ttgcaaagaggatttactgcagggtcctctccgttaaactgcgctctactaatggaggagtttatcagggaatgtcaaga tatagatttacaaccttttctagcactattggatgccaaatctgcctttgacgtagttagacaccacaacttattcagaa aactgtacatatctggagtacaaggatccctatggaatatcatctaa |
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Protein
| Protein ID | pfu_aug2.0_265.1_17215.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_265.1_17215.t1 MTTGTYILQSNRAVFNKSLVDPTCLLGGSESETLGHFLLKCDKLDVKRRTIYDELAACVHNVTGVDMSLLPVDEQLQIIL DIGHCTIPELSKMNIHDRSLIEHHTRRLCYALHSSRYYQMYLVNVLELVYDRNNVQILNDRIRSACSEYLCAVGSESENS KKVDIFCLVCSKRCLTRSTQCSICQKWVHYKCEKLHPVVISELETERNARFTCKTCKSASVTKQNTLSLTTGPCDDNTVH CVKSKAVTCNADKSIEQESVSQESHVQELTRNVVACKSKEQRSESCVLIEHDSVDNVHESRYENEASKEHQTSCMICNTP IINIERELRSHEEDEERRKAYIAQIEARNAELQQTVRILKRRIVMLEDSSIDSSQTLKNQSTNSGLSQNDVEKSSETNKL IEGIHEKVTNFIVRKVDKELQALDVVNGASAIPTNVANRTFVNQQIPSAQVPLMSSNAITEMMETADFMFLQEHWLFNFQ LPMLNEICENVLSTGKSVDDGNPITPIQKPRGYGGVGILWNIRHDHNVTVLDNGCHRIQCISVKTDDMPLLLVSVYLPTK SGQGHNEEFVDCIDQLREITEKYMDSHNILIGGDFNESVNEINRNSRRAECIKSFIMDYEFTVINEISVTTEDISDAIKK LNCGKAPDAYGIMSEHIVYLDEEILSVLCNIYNAIFNLQTVPDVLKLDTISPVFKKKGKRSESKNYRGITVLPVLGKLLE IVVRDHLRIVLDPQQNPLQRGFTAGSSPLNCALLMEKFIRECQDIDLQPFLALLDAKSAFDVVRHHNLFRKLYISGVQGS LWNIIYSLHNNSVRAVKWGGQRSCTFNVTQGVKQGGILNADLYKLYVNDLLNRIFESNVGGHIGDIPCNAPTCADDMSST SSDKNQLQQLCNMAKDYSEMEHYQLQPTKSVVLPISKKGSRKTRQETYAWKIGDTPMPVVDNAVHVGVKRTSKPTATGAI EENISKARKTMYSLMSSGLHGNNGLDPGSCIHLLKVYVIPVLLANTVNEISVTTEDISVAIKKLHCGKAPDAYGMMSEHI VYLDEEILSLLCNIYNAIFNLQTVPDVLKLGTISPVFKKKDKRSESKNYRGITVLPVLGKLLEIVVRDHLRIVLDPQQNP LQRGFTAGSSPLNCALLMEEFIRECQDIDLQPFLALLDAKSAFDVVRHHNLFRKLYISGVQGSLWNII |
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