Gene
| Gene Model ID | pfu_aug2.0_265.1_17217 |
|---|---|
| Locus | scaffold265.1 : 327280 ... 337236 : + |
| To GenomeBrowser | scaffold265.1:327280..337236 |
| Genes list of scaffold | scaffold265.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_265.1_17217.t1 | 1 | 1 | GLTP | 20 | 154 | 1.2e-27 | 96.8 | 9.1e-32 | 1.4e-27 | 96.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_265.1_17217.t1 | gi|383857613|ref|XP_003704299.1| | 3.0e-23 | |
| pfu_aug2.0_265.1_17217.t1 | gi|291228346|ref|XP_002734123.1| | PREDICTED: glycolipid transfer protein-like [Saccoglossus kowalevskii] | 5.0e-23 |
| pfu_aug2.0_265.1_17217.t1 | gi|260794742|ref|XP_002592366.1| | hypothetical protein BRAFLDRAFT_248982 [Branchiostoma floridae] | 1.0e-22 |
| pfu_aug2.0_265.1_17217.t1 | gi|260794744|ref|XP_002592367.1| | hypothetical protein BRAFLDRAFT_248963 [Branchiostoma floridae] | 2.0e-21 |
| pfu_aug2.0_265.1_17217.t1 | gi|340723584|ref|XP_003400169.1| | 2.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_265.1_17217.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_265.1_17217.t1 atgacgtttttcatcaaagaaaacgtaaacatctttgacagagtattagagggtggtgatattaaagttataccactgct tgaagcttctaggggaatagttgatttaattgatttatttggcgttgcatttggacctgtgaaaaaagatgttcttggaa atatagagaaactaaataaaaagaatgaaggtgacaaaaatacctttggcacactgaaggcaattttggaagatgagaaa ggccaaaaaaccaagaataaggtagcaacagatgccggaatatggcttaacaggggtcttcagtttctagcaggtatttt aagaaaccttcaaatagattatgtgtcgaaaacaaaggacaacgcagaaataagtgaaaacatcaaaggtgtcctggata aagcttacaaagattcacttaagccttatcatggatggatagtaggaaaagtattttctgtaagttaa |
|
Protein
| Protein ID | pfu_aug2.0_265.1_17217.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_265.1_17217.t1 MTFFIKENVNIFDRVLEGGDIKVIPLLEASRGIVDLIDLFGVAFGPVKKDVLGNIEKLNKKNEGDKNTFGTLKAILEDEK GQKTKNKVATDAGIWLNRGLQFLAGILRNLQIDYVSKTKDNAEISENIKGVLDKAYKDSLKPYHGWIVGKVFSVS |
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