Gene
| Gene Model ID | pfu_aug2.0_2653.1_12243 |
|---|---|
| Locus | scaffold2653.1 : 45558 ... 54955 : - |
| To GenomeBrowser | scaffold2653.1:45558..54955 |
| Genes list of scaffold | scaffold2653.1 |
| Synonym | pfu_aug1.0_3623.1_30474 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2653.1_12243.t1 | 3 | 1 | Fibrinogen_C | 2 | 16 | 1.2e-37 | 129.7 | 0.0038 | 56.0 | 3.2 |
| pfu_aug2.0_2653.1_12243.t1 | 3 | 2 | Fibrinogen_C | 29 | 46 | 1.2e-37 | 129.7 | 0.0016 | 24.0 | 4.4 |
| pfu_aug2.0_2653.1_12243.t1 | 3 | 3 | Fibrinogen_C | 48 | 206 | 1.2e-37 | 129.7 | 1.40004e-41 | 2.1e-37 | 128.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2653.1_12243.t1 | gi|742210798|ref|XP_010896326.1| | PREDICTED: microfibril-associated glycoprotein 4-like [Esox lucius] | 1.0e-33 |
| pfu_aug2.0_2653.1_12243.t1 | gi|296229698|ref|XP_002760377.1| | PREDICTED: angiopoietin-related protein 1 [Callithrix jacchus] | 1.0e-32 |
| pfu_aug2.0_2653.1_12243.t1 | gi|667267641|ref|XP_008569733.1| | PREDICTED: angiopoietin-related protein 1 [Galeopterus variegatus] | 2.0e-32 |
| pfu_aug2.0_2653.1_12243.t1 | gi|641709986|ref|XP_008144112.1| | PREDICTED: angiopoietin-related protein 1 [Eptesicus fuscus] | 2.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_2653.1_12243.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2653.1_12243.t1 atggaggcatactgtgactttgagacagattgtcggagttggacggtaggtatatttttacaacaaaagtgtactgtgaa agggaaggagatggagggatactgtgacacggatacaacaagcgggggtcggacggtgaaggcgacggacggatactgtg acaaggaaacagaagccggggaatggacggttgttatgaaaagatttgatggatctgtcaacttctatcagaattggaat agttacaagtatggatttggcagcgccaggggcgaatattggctgggcaatgagtacttccatatcttgacgtggaaaag taattacggagcatacttcaagttacagtcctggggaaggaagtggtattgggcctggtacacatggttttaccttcatt ccgaaaatgacgggtacaagattagatttggtggatatagaggaaatgctggacagacgctagatcttggctatacctca ggtggtagcatacaagcagagcgcttttcaacacatgacagagatcaggataaaaatgcgggaaataaagccaagagcta tggaggtggatggtggtacaaacgctgggcatactgtgcactgacggggacatatggatcaaatagtttcgtttggagaa atataggaaagctgagggcatcaactattatgctccgaccaaagcagtga |
|
Protein
| Protein ID | pfu_aug2.0_2653.1_12243.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2653.1_12243.t1 MEAYCDFETDCRSWTVGIFLQQKCTVKGKEMEGYCDTDTTSGGRTVKATDGYCDKETEAGEWTVVMKRFDGSVNFYQNWN SYKYGFGSARGEYWLGNEYFHILTWKSNYGAYFKLQSWGRKWYWAWYTWFYLHSENDGYKIRFGGYRGNAGQTLDLGYTS GGSIQAERFSTHDRDQDKNAGNKAKSYGGGWWYKRWAYCALTGTYGSNSFVWRNIGKLRASTIMLRPKQ |
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