Gene
| Gene Model ID | pfu_aug2.0_2655.1_18886 |
|---|---|
| Locus | scaffold2655.1 : 46089 ... 48815 : - |
| To GenomeBrowser | scaffold2655.1:46089..48815 |
| Genes list of scaffold | scaffold2655.1 |
| Synonym | pfu_aug1.0_3257.1_08572 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2655.1_18886.t1 | 3 | 1 | zf-RING_2 | 23 | 69 | 2.2e-09 | 37.0 | 1.3e-12 | 2.2e-09 | 37.0 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 1 | zf-C3HC4_3 | 23 | 73 | 5.1e-08 | 32.4 | 3.1e-11 | 5.1e-08 | 32.4 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 1 | zf-RING_UBOX | 24 | 66 | 7.1e-09 | 35.2 | 4.3e-12 | 7.1e-09 | 35.2 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 1 | zf-C3HC4_2 | 24 | 68 | 4.7e-08 | 32.9 | 2.9e-11 | 4.7e-08 | 32.9 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 1 | zf-C3HC4 | 24 | 68 | 2.0e-07 | 30.5 | 1.2e-10 | 2.0e-07 | 30.5 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 1 | zf-C3HC4_4 | 24 | 68 | 3.3e-07 | 30.0 | 2.0e-10 | 3.3e-07 | 30.0 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 1 | zf-RING_5 | 24 | 70 | 3.3e-06 | 26.7 | 2.0e-09 | 3.3e-06 | 26.7 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 2 | zf-RING_UBOX | 65 | 71 | 7.1e-09 | 35.2 | 0.17 | 290.0 | 1.3 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 2 | zf-C3HC4_3 | 111 | 141 | 5.1e-08 | 32.4 | 0.31 | 510.0 | 0.4 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 2 | zf-RING_5 | 113 | 145 | 3.3e-06 | 26.7 | 0.049 | 80.0 | 3.0 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 2 | zf-C3HC4_2 | 128 | 142 | 4.7e-08 | 32.9 | 0.35 | 570.0 | 0.6 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 2 | zf-C3HC4 | 130 | 141 | 2.0e-07 | 30.5 | 9.0 | 15000.0 | -6.2 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 2 | zf-RING_2 | 131 | 141 | 2.2e-09 | 37.0 | 2.6 | 4300.0 | -2.4 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 2 | zf-C3HC4_4 | 132 | 141 | 3.3e-07 | 30.0 | 1.2 | 1900.0 | -1.2 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 3 | zf-RING_UBOX | 133 | 141 | 7.1e-09 | 35.2 | 8.8 | 15000.0 | -4.2 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 3 | zf-C3HC4_2 | 174 | 205 | 4.7e-08 | 32.9 | 2.0 | 3400.0 | -1.9 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 3 | zf-C3HC4_3 | 174 | 201 | 5.1e-08 | 32.4 | 9.0 | 15000.0 | -5.2 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 3 | zf-RING_2 | 191 | 200 | 2.2e-09 | 37.0 | 9.0 | 15000.0 | -5.9 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 3 | zf-RING_5 | 193 | 198 | 3.3e-06 | 26.7 | 4.5 | 7500.0 | -3.3 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 3 | zf-C3HC4_4 | 194 | 198 | 3.3e-07 | 30.0 | 9.0 | 15000.0 | -5.4 |
| pfu_aug2.0_2655.1_18886.t1 | 3 | 3 | zf-C3HC4 | 195 | 200 | 2.0e-07 | 30.5 | 9.0 | 15000.0 | -6.6 |
Transcript
| Transcript ID | pfu_aug2.0_2655.1_18886.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2655.1_18886.t1 atggcgacagcaacgccctctcaagatgatagtgaagaaaaatcttcaacaaagagtactcggtacgtctgtcctatttg tctagaatcaatgaagactcctcgttctcttccttgtctacataccttttgtgaagattgtttacaaacttttattactg ctgctaccggtaaaaatctagatgacatcgcatgtccagtatgtagaaaacaaattatggcacccgaacctggattacca agggataaatgggcaaaagcttttccattgaactactatttatctacatatttggttgatcaaaatgcatctgatttaaa aagcgaaatagaaaattgcaaagcctgtaagagatcaaacaatttactaacactagctgatcactactgcaaaaattgtg gtgaaacaatttgtgatgcttgtaaacaactgcacaagaattttcagattatgagtagtcatgtgattgtaacattagaa catttcaaaaacaatccatccataccggagaaagatgaaatatgccagcaccatcctggtaaagttgttgaagtgtattg tcttgaccacagtaaaatgtgctgcagtgtttgctttgctacaaagcatcgacattgtaaagatgtgaaatccattgaag aatgtgctgaggatttgtcagaagatgttctcaaagtcatatctacgaggttggaggccttattggaatcagttgaagaa gaaataaaagaaaaggtaaacattggtgaaaagcggaagaaatgtaaagagcaggttgtagttaagatgacacaatgtat agaagctgctaaaaagaatcttgacattttactacaacagtttgaatctgacatagataggaaagacatttctgctgagt caaagttacaaaacattcttaaaatcttccaaggaatcaaaatatcagtgatcggagacaggcagatgttggagtcagct atcaagtatggttctaagacacaactcttttttgctctagaaaaggtgaaaattcaaatgggtgatcggatgaaacaaat atcagatgttgcaagcggatccctaacagtaaaatacactgttgatttgaagaaagttgaggaggtttgcaaattgaaaa atatttgcactgttcattcagcattgtcaaatttatccatgaaaactctaggatcacttggcataatgaaatcgtttatg gacgattcggattaccttagaagacaacgcctcattcatttagaacctcacacgattaagtgggttgagaaatggacata caaactaccttgtcgatgttttggtgccacattgtttggacagaaagtagcagtagtatcagagaggaagaaaatattta catttcttatagaagacggaagagtactatgtgaacatactattccatacatcaaagaaccggctgatatcaattatgca ggcagtgaaaacaaagtgtttgtctcttttaaaggaggaaatattttgaaggaatatcacattgacgacgaaacgatcac agaaataggacaaattttatttcaaaatattgctgagggatttttaatctttggtgatgagatagtgcatgcttcaaaac actatgtctacatctctaatagggatgggcatttgagaaaatcgattgaatccaagtctagaggagctataggatatatt gctggatgttcaaaacaacgagtgttttgtcacagagatgacactaccgtctgctacagaagaatgaatggagatactgt cggtaaaatatcactgtcacagtctacagaagatcctagaggcctcggcatcgacttccaggggaatgtatatgtctgtt gtcacttttcaaagaaacttttacaaatttctcacaaagaccacagtgtaagagtggcattagatgtggaatgttacgta attgcatttcatccagatggcatgtcatttgttctgatagattatagcggcaacatgagatattacactttgtctgagtg a |
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Protein
| Protein ID | pfu_aug2.0_2655.1_18886.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2655.1_18886.t1 MATATPSQDDSEEKSSTKSTRYVCPICLESMKTPRSLPCLHTFCEDCLQTFITAATGKNLDDIACPVCRKQIMAPEPGLP RDKWAKAFPLNYYLSTYLVDQNASDLKSEIENCKACKRSNNLLTLADHYCKNCGETICDACKQLHKNFQIMSSHVIVTLE HFKNNPSIPEKDEICQHHPGKVVEVYCLDHSKMCCSVCFATKHRHCKDVKSIEECAEDLSEDVLKVISTRLEALLESVEE EIKEKVNIGEKRKKCKEQVVVKMTQCIEAAKKNLDILLQQFESDIDRKDISAESKLQNILKIFQGIKISVIGDRQMLESA IKYGSKTQLFFALEKVKIQMGDRMKQISDVASGSLTVKYTVDLKKVEEVCKLKNICTVHSALSNLSMKTLGSLGIMKSFM DDSDYLRRQRLIHLEPHTIKWVEKWTYKLPCRCFGATLFGQKVAVVSERKKIFTFLIEDGRVLCEHTIPYIKEPADINYA GSENKVFVSFKGGNILKEYHIDDETITEIGQILFQNIAEGFLIFGDEIVHASKHYVYISNRDGHLRKSIESKSRGAIGYI AGCSKQRVFCHRDDTTVCYRRMNGDTVGKISLSQSTEDPRGLGIDFQGNVYVCCHFSKKLLQISHKDHSVRVALDVECYV IAFHPDGMSFVLIDYSGNMRYYTLSE |
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